Name: rs3100865
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3100865

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:2889542 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.481458 (127437/264690, TOPMED)
G=0.315056 (77311/245388, ALFA)
G=0.326650 (66988/205076, GENOGRAPHIC) (+ 19 more)
T=0.33549 (26142/77922, PAGE_STUDY)
T=0.36301 (10258/28258, 14KJPN)
T=0.36038 (6040/16760, 8.3KJPN)
T=0.3709 (2375/6404, 1000G_30x)
T=0.3782 (1894/5008, 1000G)
G=0.3362 (1506/4480, Estonian)
G=0.2927 (1128/3854, ALSPAC)
G=0.2913 (1080/3708, TWINSUK)
T=0.3801 (1113/2928, KOREAN)
T=0.4323 (900/2082, HGDP_Stanford)
T=0.3335 (629/1886, HapMap)
T=0.3832 (702/1832, Korea1K)
G=0.303 (182/600, NorthernSweden)
T=0.222 (98/442, SGDP_PRJ)
G=0.435 (94/216, Qatari)
T=0.346 (72/208, Vietnamese)
G=0.46 (24/52, Ancient Sardinia)
T=0.41 (18/44, Siberian)
G=0.30 (12/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: None
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	245510	T=0.684893	A=0.000000, G=0.315107
European	Sub	214918	T=0.711429	A=0.000000, G=0.288571
African	Sub	4256	T=0.1711	A=0.0000, G=0.8289
African Others	Sub	154	T=0.013	A=0.000, G=0.987
African American	Sub	4102	T=0.1770	A=0.0000, G=0.8230
Asian	Sub	3460	T=0.4078	A=0.0000, G=0.5922
East Asian	Sub	2204	T=0.4093	A=0.0000, G=0.5907
Other Asian	Sub	1256	T=0.4053	A=0.0000, G=0.5947
Latin American 1	Sub	580	T=0.572	A=0.000, G=0.428
Latin American 2	Sub	5086	T=0.4725	A=0.0000, G=0.5275
South Asian	Sub	4956	T=0.5454	A=0.0000, G=0.4546
Other	Sub	12254	T=0.62608	A=0.00000, G=0.37392

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.481458	G=0.518542
Allele Frequency Aggregator	Total	Global	245388	T=0.684944	A=0.000000, G=0.315056
Allele Frequency Aggregator	European	Sub	214814	T=0.711457	A=0.000000, G=0.288543
Allele Frequency Aggregator	Other	Sub	12250	T=0.62612	A=0.00000, G=0.37388
Allele Frequency Aggregator	Latin American 2	Sub	5086	T=0.4725	A=0.0000, G=0.5275
Allele Frequency Aggregator	South Asian	Sub	4956	T=0.5454	A=0.0000, G=0.4546
Allele Frequency Aggregator	African	Sub	4242	T=0.1714	A=0.0000, G=0.8286
Allele Frequency Aggregator	Asian	Sub	3460	T=0.4078	A=0.0000, G=0.5922
Allele Frequency Aggregator	Latin American 1	Sub	580	T=0.572	A=0.000, G=0.428
Genographic Project	Global	Study-wide	205076	T=0.673350	A=0.000000, G=0.326650
The PAGE Study	Global	Study-wide	77922	T=0.33549	G=0.66451
The PAGE Study	AfricanAmerican	Sub	32112	T=0.16551	G=0.83449
The PAGE Study	Mexican	Sub	10732	T=0.45760	G=0.54240
The PAGE Study	Asian	Sub	8238	T=0.3753	G=0.6247
The PAGE Study	PuertoRican	Sub	7870	T=0.5084	G=0.4916
The PAGE Study	NativeHawaiian	Sub	4494	T=0.4729	G=0.5271
The PAGE Study	Cuban	Sub	4184	T=0.5664	G=0.4336
The PAGE Study	Dominican	Sub	3794	T=0.3946	G=0.6054
The PAGE Study	CentralAmerican	Sub	2428	T=0.3847	G=0.6153
The PAGE Study	SouthAmerican	Sub	1964	T=0.4104	G=0.5896
The PAGE Study	NativeAmerican	Sub	1256	T=0.5358	G=0.4642
The PAGE Study	SouthAsian	Sub	850	T=0.492	G=0.508
14KJPN	JAPANESE	Study-wide	28258	T=0.36301	G=0.63699
8.3KJPN	JAPANESE	Study-wide	16760	T=0.36038	G=0.63962
1000Genomes_30x	Global	Study-wide	6404	T=0.3709	G=0.6291
1000Genomes_30x	African	Sub	1786	T=0.0398	G=0.9602
1000Genomes_30x	Europe	Sub	1266	T=0.6722	G=0.3278
1000Genomes_30x	South Asian	Sub	1202	T=0.4875	G=0.5125
1000Genomes_30x	East Asian	Sub	1170	T=0.3299	G=0.6701
1000Genomes_30x	American	Sub	980	T=0.491	G=0.509
1000Genomes	Global	Study-wide	5008	T=0.3782	G=0.6218
1000Genomes	African	Sub	1322	T=0.0446	G=0.9554
1000Genomes	East Asian	Sub	1008	T=0.3333	G=0.6667
1000Genomes	Europe	Sub	1006	T=0.6690	G=0.3310
1000Genomes	South Asian	Sub	978	T=0.489	G=0.511
1000Genomes	American	Sub	694	T=0.501	G=0.499
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.6638	G=0.3362
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.7073	G=0.2927
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.7087	G=0.2913
KOREAN population from KRGDB	KOREAN	Study-wide	2928	T=0.3801	C=0.0000, G=0.6199
HGDP-CEPH-db Supplement 1	Global	Study-wide	2082	T=0.4323	G=0.5677
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	T=0.321	G=0.679
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	T=0.587	G=0.413
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	348	T=0.624	G=0.376
HGDP-CEPH-db Supplement 1	Europe	Sub	320	T=0.700	G=0.300
HGDP-CEPH-db Supplement 1	Africa	Sub	242	T=0.029	G=0.971
HGDP-CEPH-db Supplement 1	America	Sub	216	T=0.241	G=0.759
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.08	G=0.92
HapMap	Global	Study-wide	1886	T=0.3335	G=0.6665
HapMap	American	Sub	770	T=0.497	G=0.503
HapMap	African	Sub	688	T=0.055	G=0.945
HapMap	Asian	Sub	252	T=0.349	G=0.651
HapMap	Europe	Sub	176	T=0.682	G=0.318
Korean Genome Project	KOREAN	Study-wide	1832	T=0.3832	G=0.6168
Northern Sweden	ACPOP	Study-wide	600	T=0.697	G=0.303
SGDP_PRJ	Global	Study-wide	442	T=0.222	G=0.778
Qatari	Global	Study-wide	216	T=0.565	G=0.435
A Vietnamese Genetic Variation Database	Global	Study-wide	208	T=0.346	G=0.654
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	52	T=0.54	G=0.46
Siberian	Global	Study-wide	44	T=0.41	G=0.59
The Danish reference pan genome	Danish	Study-wide	40	T=0.70	G=0.30

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.2889542T>A
GRCh38.p14 chr 1	NC_000001.11:g.2889542T>C
GRCh38.p14 chr 1	NC_000001.11:g.2889542T>G
GRCh37.p13 chr 1	NC_000001.10:g.2806107T>A
GRCh37.p13 chr 1	NC_000001.10:g.2806107T>C
GRCh37.p13 chr 1	NC_000001.10:g.2806107T>G

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C	G
GRCh38.p14 chr 1	NC_000001.11:g.2889542=	NC_000001.11:g.2889542T>A	NC_000001.11:g.2889542T>C	NC_000001.11:g.2889542T>G
GRCh37.p13 chr 1	NC_000001.10:g.2806107=	NC_000001.10:g.2806107T>A	NC_000001.10:g.2806107T>C	NC_000001.10:g.2806107T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

137 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss4338757	Mar 26, 2002 (103)
2	SC_SNP	ss12992588	Dec 05, 2003 (119)
3	CSHL-HAPMAP	ss16416864	Feb 27, 2004 (120)
4	CSHL-HAPMAP	ss17346809	Feb 27, 2004 (120)
5	ABI	ss41193138	Mar 15, 2006 (126)
6	ILLUMINA	ss66778402	Dec 01, 2006 (127)
7	ILLUMINA	ss67289934	Dec 01, 2006 (127)
8	ILLUMINA	ss67693354	Dec 01, 2006 (127)
9	ILLUMINA	ss70768509	May 23, 2008 (130)
10	ILLUMINA	ss71343473	May 17, 2007 (127)
11	ILLUMINA	ss75788341	Dec 07, 2007 (129)
12	ILLUMINA	ss79158122	Dec 14, 2007 (130)
13	HGSV	ss83465690	Dec 14, 2007 (130)
14	KRIBB_YJKIM	ss84147181	Dec 14, 2007 (130)
15	BCMHGSC_JDW	ss87169549	Mar 23, 2008 (129)
16	BGI	ss105113950	Dec 01, 2009 (131)
17	1000GENOMES	ss109955418	Jan 24, 2009 (130)
18	ILLUMINA-UK	ss118446512	Feb 14, 2009 (130)
19	ILLUMINA	ss122168879	Dec 01, 2009 (131)
20	ENSEMBL	ss137760643	Dec 01, 2009 (131)
21	ILLUMINA	ss154253568	Dec 01, 2009 (131)
22	GMI	ss154548561	Dec 01, 2009 (131)
23	ILLUMINA	ss159430368	Dec 01, 2009 (131)
24	ILLUMINA	ss160610247	Dec 01, 2009 (131)
25	ENSEMBL	ss161243066	Dec 01, 2009 (131)
26	ILLUMINA	ss171536374	Jul 04, 2010 (132)
27	ILLUMINA	ss173561103	Jul 04, 2010 (132)
28	BUSHMAN	ss197910869	Jul 04, 2010 (132)
29	1000GENOMES	ss218197865	Jul 14, 2010 (132)
30	1000GENOMES	ss230400677	Jul 14, 2010 (132)
31	1000GENOMES	ss238119831	Jul 15, 2010 (132)
32	GMI	ss275688310	May 04, 2012 (137)
33	PJP	ss290496854	May 09, 2011 (134)
34	ILLUMINA	ss480751380	May 04, 2012 (137)
35	ILLUMINA	ss480767290	May 04, 2012 (137)
36	ILLUMINA	ss481655425	Sep 08, 2015 (146)
37	ILLUMINA	ss485170465	May 04, 2012 (137)
38	EXOME_CHIP	ss491284814	May 04, 2012 (137)
39	TISHKOFF	ss553726296	Apr 25, 2013 (138)
40	SSMP	ss647529986	Apr 25, 2013 (138)
41	ILLUMINA	ss780799967	Sep 08, 2015 (146)
42	ILLUMINA	ss783031435	Sep 08, 2015 (146)
43	ILLUMINA	ss783481330	Sep 08, 2015 (146)
44	ILLUMINA	ss825488640	Apr 01, 2015 (144)
45	ILLUMINA	ss832289063	Sep 08, 2015 (146)
46	ILLUMINA	ss832941976	Jul 12, 2019 (153)
47	EVA-GONL	ss974786824	Aug 21, 2014 (142)
48	JMKIDD_LAB	ss1067621489	Aug 21, 2014 (142)
49	1000GENOMES	ss1289415875	Aug 21, 2014 (142)
50	DDI	ss1425690225	Apr 01, 2015 (144)
51	EVA_GENOME_DK	ss1573856955	Apr 01, 2015 (144)
52	EVA_DECODE	ss1584146361	Apr 01, 2015 (144)
53	EVA_UK10K_ALSPAC	ss1599409481	Apr 01, 2015 (144)
54	EVA_UK10K_TWINSUK	ss1642403514	Apr 01, 2015 (144)
55	EVA_SVP	ss1712306228	Apr 01, 2015 (144)
56	ILLUMINA	ss1751913918	Sep 08, 2015 (146)
57	ILLUMINA	ss1751913919	Sep 08, 2015 (146)
58	HAMMER_LAB	ss1793755176	Sep 08, 2015 (146)
59	ILLUMINA	ss1917721513	Feb 12, 2016 (147)
60	WEILL_CORNELL_DGM	ss1917981648	Feb 12, 2016 (147)
61	ILLUMINA	ss1945982490	Feb 12, 2016 (147)
62	ILLUMINA	ss1945982491	Feb 12, 2016 (147)
63	ILLUMINA	ss1958233410	Feb 12, 2016 (147)
64	ILLUMINA	ss1958233411	Feb 12, 2016 (147)
65	JJLAB	ss2019507112	Sep 14, 2016 (149)
66	USC_VALOUEV	ss2147496950	Dec 20, 2016 (150)
67	HUMAN_LONGEVITY	ss2159501605	Dec 20, 2016 (150)
68	SYSTEMSBIOZJU	ss2624269383	Nov 08, 2017 (151)
69	ILLUMINA	ss2632467341	Nov 08, 2017 (151)
70	ILLUMINA	ss2632467342	Nov 08, 2017 (151)
71	ILLUMINA	ss2634995443	Nov 08, 2017 (151)
72	GRF	ss2697390519	Nov 08, 2017 (151)
73	ILLUMINA	ss2710663865	Nov 08, 2017 (151)
74	GNOMAD	ss2750877122	Nov 08, 2017 (151)
75	SWEGEN	ss2986187265	Nov 08, 2017 (151)
76	ILLUMINA	ss3021046334	Nov 08, 2017 (151)
77	ILLUMINA	ss3021046335	Nov 08, 2017 (151)
78	BIOINF_KMB_FNS_UNIBA	ss3023517334	Nov 08, 2017 (151)
79	CSHL	ss3343284344	Nov 08, 2017 (151)
80	ILLUMINA	ss3625523717	Oct 11, 2018 (152)
81	ILLUMINA	ss3633571865	Oct 11, 2018 (152)
82	ILLUMINA	ss3634302987	Oct 11, 2018 (152)
83	ILLUMINA	ss3634302988	Oct 11, 2018 (152)
84	ILLUMINA	ss3635266053	Oct 11, 2018 (152)
85	ILLUMINA	ss3635979344	Oct 11, 2018 (152)
86	ILLUMINA	ss3637016401	Oct 11, 2018 (152)
87	ILLUMINA	ss3637733314	Oct 11, 2018 (152)
88	ILLUMINA	ss3638888041	Oct 11, 2018 (152)
89	ILLUMINA	ss3639440743	Oct 11, 2018 (152)
90	ILLUMINA	ss3640010352	Oct 11, 2018 (152)
91	ILLUMINA	ss3640010353	Oct 11, 2018 (152)
92	ILLUMINA	ss3640973457	Oct 11, 2018 (152)
93	ILLUMINA	ss3641267270	Oct 11, 2018 (152)
94	ILLUMINA	ss3642747539	Oct 11, 2018 (152)
95	ILLUMINA	ss3644478343	Oct 11, 2018 (152)
96	ILLUMINA	ss3644478344	Oct 11, 2018 (152)
97	ILLUMINA	ss3651368926	Oct 11, 2018 (152)
98	ILLUMINA	ss3651368927	Oct 11, 2018 (152)
99	EGCUT_WGS	ss3654288229	Jul 12, 2019 (153)
100	EVA_DECODE	ss3686029779	Jul 12, 2019 (153)
101	ACPOP	ss3726732018	Jul 12, 2019 (153)
102	ILLUMINA	ss3744040927	Jul 12, 2019 (153)
103	ILLUMINA	ss3744337949	Jul 12, 2019 (153)
104	ILLUMINA	ss3744603913	Jul 12, 2019 (153)
105	ILLUMINA	ss3744603914	Jul 12, 2019 (153)
106	EVA	ss3745743366	Jul 12, 2019 (153)
107	PAGE_CC	ss3770780010	Jul 12, 2019 (153)
108	ILLUMINA	ss3772105642	Jul 12, 2019 (153)
109	ILLUMINA	ss3772105643	Jul 12, 2019 (153)
110	KHV_HUMAN_GENOMES	ss3798765857	Jul 12, 2019 (153)
111	EVA	ss3825989519	Apr 25, 2020 (154)
112	EVA	ss3836382068	Apr 25, 2020 (154)
113	EVA	ss3841786180	Apr 25, 2020 (154)
114	HGDP	ss3847322306	Apr 25, 2020 (154)
115	SGDP_PRJ	ss3848048703	Apr 25, 2020 (154)
116	KRGDB	ss3892908127	Apr 25, 2020 (154)
117	KOGIC	ss3943672088	Apr 25, 2020 (154)
118	EVA	ss3984774500	Apr 25, 2021 (155)
119	TOPMED	ss4437033831	Apr 25, 2021 (155)
120	TOMMO_GENOMICS	ss5142160738	Apr 25, 2021 (155)
121	1000G_HIGH_COVERAGE	ss5240935863	Oct 12, 2022 (156)
122	GENOGRAPHIC	ss5314461084	Oct 12, 2022 (156)
123	EVA	ss5314586958	Oct 12, 2022 (156)
124	EVA	ss5316313256	Oct 12, 2022 (156)
125	HUGCELL_USP	ss5442166307	Oct 12, 2022 (156)
126	EVA	ss5505750260	Oct 12, 2022 (156)
127	1000G_HIGH_COVERAGE	ss5512588765	Oct 12, 2022 (156)
128	SANFORD_IMAGENETICS	ss5624194230	Oct 12, 2022 (156)
129	SANFORD_IMAGENETICS	ss5624789866	Oct 12, 2022 (156)
130	TOMMO_GENOMICS	ss5666360576	Oct 12, 2022 (156)
131	YY_MCH	ss5800263702	Oct 12, 2022 (156)
132	EVA	ss5831446895	Oct 12, 2022 (156)
133	EVA	ss5847522326	Oct 12, 2022 (156)
134	EVA	ss5848755378	Oct 12, 2022 (156)
135	EVA	ss5906774813	Oct 12, 2022 (156)
136	EVA	ss5936615587	Oct 12, 2022 (156)
137	EVA	ss5979260391	Oct 12, 2022 (156)
138	1000Genomes	NC_000001.10 - 2806107	Oct 11, 2018 (152)
139	1000Genomes_30x	NC_000001.11 - 2889542	Oct 12, 2022 (156)
140	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 2806107	Oct 11, 2018 (152)
141	Genetic variation in the Estonian population	NC_000001.10 - 2806107	Oct 11, 2018 (152)
142	Genographic Project	NC_000001.11 - 2889542	Oct 12, 2022 (156)
143	The Danish reference pan genome	NC_000001.10 - 2806107	Apr 25, 2020 (154)
144	gnomAD - Genomes Submission ignored due to conflicting rows: Row 631808 (NC_000001.11:2889541:T:A 2/139758) Row 631809 (NC_000001.11:2889541:T:G 69820/139704)	-	Apr 25, 2021 (155)
145	gnomAD - Genomes Submission ignored due to conflicting rows: Row 631808 (NC_000001.11:2889541:T:A 2/139758) Row 631809 (NC_000001.11:2889541:T:G 69820/139704)	-	Apr 25, 2021 (155)
146	HGDP-CEPH-db Supplement 1	NC_000001.9 - 2795967	Apr 25, 2020 (154)
147	HapMap	NC_000001.11 - 2889542	Apr 25, 2020 (154)
148	KOREAN population from KRGDB	NC_000001.10 - 2806107	Apr 25, 2020 (154)
149	Korean Genome Project	NC_000001.11 - 2889542	Apr 25, 2020 (154)
150	Northern Sweden	NC_000001.10 - 2806107	Jul 12, 2019 (153)
151	The PAGE Study	NC_000001.11 - 2889542	Jul 12, 2019 (153)
152	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000001.10 - 2806107	Apr 25, 2021 (155)
153	Qatari	NC_000001.10 - 2806107	Apr 25, 2020 (154)
154	SGDP_PRJ	NC_000001.10 - 2806107	Apr 25, 2020 (154)
155	Siberian	NC_000001.10 - 2806107	Apr 25, 2020 (154)
156	8.3KJPN	NC_000001.10 - 2806107	Apr 25, 2021 (155)
157	14KJPN	NC_000001.11 - 2889542	Oct 12, 2022 (156)
158	TopMed	NC_000001.11 - 2889542	Apr 25, 2021 (155)
159	UK 10K study - Twins	NC_000001.10 - 2806107	Oct 11, 2018 (152)
160	A Vietnamese Genetic Variation Database	NC_000001.10 - 2806107	Jul 12, 2019 (153)
161	ALFA	NC_000001.11 - 2889542	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57014980	May 23, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2750877122	NC_000001.10:2806106:T:A	NC_000001.11:2889541:T:A	(self)
34287, 15196221964, ss5314461084	NC_000001.11:2889541:T:A	NC_000001.11:2889541:T:A	(self)
85521, ss3892908127	NC_000001.10:2806106:T:C	NC_000001.11:2889541:T:C	(self)
ss83465690, ss3638888041, ss3639440743	NC_000001.8:2829263:T:G	NC_000001.11:2889541:T:G	(self)
198, ss87169549, ss109955418, ss118446512, ss197910869, ss275688310, ss290496854, ss480751380, ss825488640, ss1584146361, ss1712306228, ss2634995443, ss3642747539, ss3847322306	NC_000001.9:2795966:T:G	NC_000001.11:2889541:T:G	(self)
82875, 34360, 26477, 1364189, 85521, 16883, 427, 23578, 65683, 13304, 130045, 34360, 7005, ss218197865, ss230400677, ss238119831, ss480767290, ss481655425, ss485170465, ss491284814, ss553726296, ss647529986, ss780799967, ss783031435, ss783481330, ss832289063, ss832941976, ss974786824, ss1067621489, ss1289415875, ss1425690225, ss1573856955, ss1599409481, ss1642403514, ss1751913918, ss1751913919, ss1793755176, ss1917721513, ss1917981648, ss1945982490, ss1945982491, ss1958233410, ss1958233411, ss2019507112, ss2147496950, ss2624269383, ss2632467341, ss2632467342, ss2697390519, ss2710663865, ss2750877122, ss2986187265, ss3021046334, ss3021046335, ss3343284344, ss3625523717, ss3633571865, ss3634302987, ss3634302988, ss3635266053, ss3635979344, ss3637016401, ss3637733314, ss3640010352, ss3640010353, ss3640973457, ss3641267270, ss3644478343, ss3644478344, ss3651368926, ss3651368927, ss3654288229, ss3726732018, ss3744040927, ss3744337949, ss3744603913, ss3744603914, ss3745743366, ss3772105642, ss3772105643, ss3825989519, ss3836382068, ss3848048703, ss3892908127, ss3984774500, ss5142160738, ss5314586958, ss5316313256, ss5505750260, ss5624194230, ss5624789866, ss5831446895, ss5847522326, ss5936615587, ss5979260391	NC_000001.10:2806106:T:G	NC_000001.11:2889541:T:G	(self)
114700, 34287, 1520, 50089, 1479, 197680, 640166, 15196221964, ss2159501605, ss3023517334, ss3686029779, ss3770780010, ss3798765857, ss3841786180, ss3943672088, ss4437033831, ss5240935863, ss5314461084, ss5442166307, ss5512588765, ss5666360576, ss5800263702, ss5848755378, ss5906774813	NC_000001.11:2889541:T:G	NC_000001.11:2889541:T:G	(self)
ss12992588, ss16416864, ss17346809	NT_004321.15:112881:T:G	NC_000001.11:2889541:T:G	(self)
ss4338757, ss41193138, ss66778402, ss67289934, ss67693354, ss70768509, ss71343473, ss75788341, ss79158122, ss84147181, ss105113950, ss122168879, ss137760643, ss154253568, ss154548561, ss159430368, ss160610247, ss161243066, ss171536374, ss173561103	NT_004350.19:2284738:T:G	NC_000001.11:2889541:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3100865

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3100865