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Submitted SNP(ss) Details: ss107938263           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_9_chr1_742584
RefSNP(rs#)rs3131972
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:160

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938263|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GTAGAATTTA ACTAAATGAA AGAGCTTCTG CACAGCAAGA GAAACGTTTG ACAGAGAATA
 CAGACAACCT ACTGAATGAG AGAAACTATT TGCAAACTAT GCATCTGACA AAGGCCTAAT
 ATCCAGAATC TACAGGGAAC TTATGCAAAA AACGTTCACT TTCTGTCTGT GTTCACGTCA
 CCAAGAGAAT AGAAAGGAAA
 R
 GGGAAGAATG CAAAAGTCAA AGACACGTCA CCCTCCTTGA GACAGCCCTC CAGTCCAGGC
 CAAATCTCAG CCTGCCCTTG GTCCGCTGTG GTTGGGCCTG CACCCAAGCC ATGAGCACAC
 GCAGCAATTG TGGCAGCAGA AGCTTCCTCT GGGCTCAGAC TCAGGCTGAT GCTGCGTCAG
 GACCTGCCGC GGTCTCGGCT

  Submitted Frequency for ss107938263 back to top
There is no frequency submission for ss107938263.


  dbSNP summary of Genotypes for ss107938263 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938263.


  Submitted individual genotype for ss107938263 back to top
There is no individual genotype data for ss107938263.