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Submitted SNP(ss) Details: ss107938272           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_18_chr1_747597
RefSNP(rs#)rs4951929
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:129

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938272|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGCAGATC CACCCTGTCT ATACTACCTG CCTGTCTAGC AGATCCACCC TGTCTATACT
 ACCTGCCCAT CCAGCAGGTC CACCCTGTCT ACACTACCTC CCTGCCGAGT AGATCCACCC
 TGTCTACACT ACCTGCCTGG CCAGAAGATC CACCCTGTCT ACACTACCTT CCTTGCCAGT
 AATGCACGCT ATCTACACTA
 Y
 CTGCCTGGCT AGCAGATCCA CGCTGTCTAT ACTACCTCCC TGTCCAGTAG ACCCACCCTG
 TCTATACTAC CTCCCTGGCC AGCAGATCCA CCCTGTCTAT ACTACCTGCC TGGCCAGCAG
 ATCCACCCTG TCTATACTAC CTGACTGGCC AGCAGATCCA CCCTGTCTAC ACTACCTGCC
 TGCCCAGAAG ATGCGCCATG

  Submitted Frequency for ss107938272 back to top
There is no frequency submission for ss107938272.


  dbSNP summary of Genotypes for ss107938272 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938272.


  Submitted individual genotype for ss107938272 back to top
There is no individual genotype data for ss107938272.