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Submitted SNP(ss) Details: ss107938273           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_19_chr1_747799
RefSNP(rs#)rs4951862
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938273|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 TGCCTGGCTA GCAGATCCAC GCTGTCTATA CTACCTCCCT GTCCAGTAGA CCCACCCTGT
 CTATACTACC TCCCTGGCCA GCAGATCCAC CCTGTCTATA CTACCTGCCT GGCCAGCAGA
 TCCACCCTGT CTATACTACC TGACTGGCCA GCAGATCCAC CCTGTCTACA CTACCTGCCT
 GCCCAGAAGA TGCGCCATGT
 M
 TACACTACCT GCTTGTCCAG CAGATCCACC CTGTCTACAC TAGCTGCCTG TCCAGCATGT
 CCACCCTATC TACACTACCT GCCTGTCCAG CAGATCCACC CTGTCTATAC TACCTGCCTA
 TCCAGCAGAT CTACCCTGTC TACACTACCT GCCTGCTCAG CAGATCCACC CTGTCTATAC
 TAACTGCCTG GCCAGCAGAT

  Submitted Frequency for ss107938273 back to top
There is no frequency submission for ss107938273.


  dbSNP summary of Genotypes for ss107938273 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938273.


  Submitted individual genotype for ss107938273 back to top
There is no individual genotype data for ss107938273.