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Submitted SNP(ss) Details: ss107938285           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_31_chr1_775852
RefSNP(rs#)rs2980300
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:116

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938285|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CCCTCTGCAT TCACGTCAAG CTGTGCAGGG AATGCTAAAC AGAGGCAGAT CTAAACTTAG
 GAGTTAGGCT TCTTCTCCAT GGAGATGTGG ATCTGCACAG ACAAAGTGTC CAAGTGGGAT
 TTTCCTGCTA TTTCAAGGAC TGCTGCTGCA CCCTGCTGGC TCTTCCTGCA CTCCCTGCCT
 CCAGGAATGA CTGTGTCTCT
 Y
 TGAGTTAGTG AAGTCATCAA CTTTTTTTTT TAAATCTCTT ATTATTATTA TTATACTTTA
 AGTTTTAGGG TACATGTGCA CATTGTGCAG GTTAGTTACA TATGTATACA TGTGCCATGC
 TGGTGCGCTG CACCCACTAA CTCGTCATGT AGCATTAGGT ATATCTCCCA GTGCTATCCC
 TCCCCCCTCC CCCCACCCCA

  Submitted Frequency for ss107938285 back to top
There is no frequency submission for ss107938285.


  dbSNP summary of Genotypes for ss107938285 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938285.


  Submitted individual genotype for ss107938285 back to top
There is no individual genotype data for ss107938285.