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Submitted SNP(ss) Details: ss107938295           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_41_chr1_795419
RefSNP(rs#)rs72631880
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:74

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938295|allelePos=201|len=401|taxid=9606|alleles='T/A'|mol=Genomic
 CAGTGCACCT GCTCCTGCCC TCGCCTCGGT CTCTGCCAGG ACCCCGACGC CCAGCCGGAC
 CCTGCCCTCC AGCGGGGCCG CGGCTCCACG GCCCGCAACA GCAGCCCCAC CCGGCATTCG
 GCGCGCTCCG CGGGGCAGAG GTCGCGGTGT CCTCAGGCTG TGGCGCCGGC CTACAACCCC
 CACGCCGGGC CCGGGCCCCG
 W
 GATTATATTT GGGCCCCGTG TGATTATATT TGACAGGTCT TAGTTGACGC GCTGTTCAGC
 GCTTTGAGTT CGGCTGAGTT TTGGGTTGGA GAATTTTCTT CCACAGGGGA TTGTCTTGGA
 TTTTTCTATT TCTCCCTCAG TATCCACCTG GAAAACATTT CAATTAATTT ATATTCACTT
 AAACATTTCC GTGCAAAAAC

  Submitted Frequency for ss107938295 back to top
There is no frequency submission for ss107938295.


  dbSNP summary of Genotypes for ss107938295 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938295.


  Submitted individual genotype for ss107938295 back to top
There is no individual genotype data for ss107938295.