NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss107938298           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_44_chr1_798494
RefSNP(rs#)rs11240779
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:98

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938298|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GGGGGTTTCA TTTGCTCCAC CTGCAGCGAG GTTAGCCCGT CTCAGGTTTG ACTCCTGACT
 TAATTTCTAA CAGGGGAAGC TGCTGTCCTG TAACTCCGGG GGAGGGGGTT TCATTTGCTC
 CACCTGCAGG GCGAATGGTG CTCTCACCTC ACACGTGACA CTTGGTCCTT TTTGCATTAT
 GGTGGTGACC ACTGATGACC
 R
 TATACCTGGC CGTGGAGTGA CTGGCTGTAC TGTCTTACAG GTCAGTGTGG GGCCAGAAAA
 AACTGGGCCA AGGGACACTA CACAGAAGGC ACCGAGCTGA TGGAGTCAGT GATGTACGTT
 GTCAGAAAGG AGGCTGAGAG CTGTAACTGC CTGCAGGGTT TCCAGCTGAC CCACTCCCTG
 GGTTGGGGGA CTGGGTCTGG

  Submitted Frequency for ss107938298 back to top
There is no frequency submission for ss107938298.


  dbSNP summary of Genotypes for ss107938298 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938298.


  Submitted individual genotype for ss107938298 back to top
There is no individual genotype data for ss107938298.