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Submitted SNP(ss) Details: ss107938299           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_45_chr1_799739
RefSNP(rs#)rs57181708
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:141

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938299|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GCCACGGCTG AGGAGGAGGA GTTTGAGGAG TATGCTGAGG AGGAGGTGGC CTAGAATTTT
 CCTTTTCTAG GTAAAGGGGG GAAGCAGCGT GGATTCTTAA CTGTTCTGAC AGCCATGTGT
 CTCTAAGCAC TTATTCATTT GTGTCTTCAC CTCTCCTCCT GCTGCATTTT AAAGCACTTT
 TATAGTATGC AGTTTTGCCT
 R
 ATATTTTCAC AGCATCTGGT TTCACCTCCA ACTTCTTTCC ATGGGCCCTC CGGCTACTGC
 TGCCAGATGT GCATAGTTGT CCTGCAAGGC TGAAGCTGTC TGGGTTTATC ACATGCCCAG
 GAACAAGCAT TCCAGTGGCT CTAGGAGGGG TCGGCATGGG TTGTGGACAT GGCAGGCAGG
 TGCCACATGA ACTTGGGGAT

  Submitted Frequency for ss107938299 back to top
There is no frequency submission for ss107938299.


  dbSNP summary of Genotypes for ss107938299 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938299.


  Submitted individual genotype for ss107938299 back to top
There is no individual genotype data for ss107938299.