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Submitted SNP(ss) Details: ss107938300           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_46_chr1_801628
RefSNP(rs#)rs72631881
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:53

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938300|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CACTCGCCCA CACTCGCCCA CACTCGCCCA CACTCCCCCA CACTCGCCCA CACTCCCCCA
 CACTCGCCCA CACTCGCCCA CACTCCCCCA CACTCCCTCA CAGTCGCCCA CACTCCCCCA
 CACTCCCCCA CACTCCCCCA CACTCGCCCA CACTCCCCCA CGCTCCCCCA TACTCGCCCA
 CGCTCCCCCA TACTCGCCCA
 Y
 GCTCCCCCAC GCTCCCCCAT ACTCCCCCAC ACTCCCCCAT ACTCCCCCAA ACTGTTCTCA
 GGTTAGGAAA AGGGGCCTCT GTGACAGCCC CACTCAGTGG CTCTCACTGT CTGAGGGGTG
 TCCTTGCCCA ACCCAGGTGC GCACCCATCT GAGATGGCCT TGCATGGACC TGGTTGGGAA
 GGTTCAGCTA CAGCAACCAC

  Submitted Frequency for ss107938300 back to top
There is no frequency submission for ss107938300.


  dbSNP summary of Genotypes for ss107938300 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938300.


  Submitted individual genotype for ss107938300 back to top
There is no individual genotype data for ss107938300.