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Submitted SNP(ss) Details: ss107938306           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_52_chr1_807097
RefSNP(rs#)rs4970387
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:128

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938306|allelePos=201|len=401|taxid=9606|alleles='A/T'|mol=Genomic
 GATTTTTGGT TTCTGAGATG AAATCATGGT AGGTGACTGA GAAATGCTTA AAAATTAGCC
 AAAACTTAAA ATTAAGTTAA AGTTTACTAA GTCACCCTGT ATTGCTGGTA ATAAAAAATA
 AGTCTTTAAT GGTATAAAAG CAAACTTCAG AGAATGTTTT CTTTTCCCCA GTTGACATCT
 AAATTAAAAG CTGGAAAAAA
 W
 TTTTATGGCT TTATGCGTTT TTCACTTTAC AATTTCAACT TTTTCTGGTT AAAATTTTTC
 CAAACAGATT CCTGTGTATT TGAAAGACAA ATTTTTTTTA GTTGAAATGC TTAAGCAGTT
 AAATAAGGCC ATGAAACTTT CTTGAACCTG TGGGAATCCA TGAGAAAATC TGACATTATG
 TTCTATTCTC TTGGAAGGTA

  Submitted Frequency for ss107938306 back to top
There is no frequency submission for ss107938306.


  dbSNP summary of Genotypes for ss107938306 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938306.


  Submitted individual genotype for ss107938306 back to top
There is no individual genotype data for ss107938306.