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Submitted SNP(ss) Details: ss107938308           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_54_chr1_811811
RefSNP(rs#)rs6671445
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:110

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938308|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 GTTCTGTCCA TAGAACTCTG GCTGGAGTTG CTAAAATTCC AATGGGGAGG CCCTGTCCAG
 TGAGGAGGGA TGTGTTTTGG TCTCACTTAA AGAAGCAGCC TGGCCACAAT CAGGCACAGC
 AGCTGTGCTG TGTTATGGGA AACTCCTCCT GGACCCTGGT GCCAGCAGGC TAGAGTGGCC
 AACTCAAACC ACAGATATAG
 Y
 GGCTGCCCTT CCCTCCAGGA ACTCGGTCCA TCTCTGGCTG TCTCCAGCCT GCTGCCTCTG
 GCCAGCTGGA ATTCCAAGCC AATGGGTTTT GTGAGGTGCT GTGGGAGTGG GGCCTCAGAA
 TGATGTCACT TGGCTCCCTG GATTCAGCCC CCTTCCTAGG GGAATGCACA GATGTATCTC
 CCACTTTGCT GGAATTCTCG

  Submitted Frequency for ss107938308 back to top
There is no frequency submission for ss107938308.


  dbSNP summary of Genotypes for ss107938308 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938308.


  Submitted individual genotype for ss107938308 back to top
There is no individual genotype data for ss107938308.