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Submitted SNP(ss) Details: ss107938311           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_57_chr1_815273
RefSNP(rs#)rs13303179
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:163

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938311|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GCTCATGCTG CTAACCTCTC TGAGACTTGA CTCTTCATTT ATGAAATGAG GATAAAGCCC
 CTTCTCTCAG GGGCTGTGCC AAGGATGAAA TGAGTCACGC ATTGGTCAGG ACAGGTGATG
 CTGTGTAACA AGCCCCTAAA CCTCAGTGGC GTCAACAGCA AAGTTGACTT CTTTTCTTTT
 TTCTATTTTT TCTTTTGTTG
 R
 GGGGGTGGGG AGGTGGATGG AGTCTCACTC TGTCACCCGG GCTGGAGTGC AGTGGTGCAA
 TCTCAGCTCA CTGCAACCTC CACCTCCTGG GTTCAAGTGA TTCTCCTGCC TCAGCCTCCT
 GAGTAGCTGG GGCTACAGAT GTCAGCCACC AGGCCCAGCT AATTTTTTGT ATTTTTAGTA
 GAGATGGGGT TTCACCATGT

  Submitted Frequency for ss107938311 back to top
There is no frequency submission for ss107938311.


  dbSNP summary of Genotypes for ss107938311 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938311.


  Submitted individual genotype for ss107938311 back to top
There is no individual genotype data for ss107938311.