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Submitted SNP(ss) Details: ss107938314           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_60_chr1_821772
RefSNP(rs#)rs9697642
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:100

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938314|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TACCTGATTT TTTCTTAATT ATGAAAACTG GAGAATTCCA AGGGGAAAAT GTTGGAGCTA
 TGTGCCCATT TTCTAATTGT TCAGTAACTA ATTTCTCTAA AGCGTCCAGT TTCTCTTTGC
 TTAGCAGCCA TTATTCTATC CATATTGGCT TATCTGTTAA CCATTTGTAA AGGTATAGGT
 TCTGGAAGCT TAACAACGGC
 Y
 GCCGTCAAAA ATGATATCCT AATCTTTGGC AGGAACTTTG TCTTTCCACT TGAAGCAGTT
 CTTTCAAACC TTGCAAATAT TTTCCTAGTC CCATACCAGG AACATGCCCC ATTTCATGAA
 TTATATGTCG ACTTTGAGGG CTATATAATT GTTCTGGAAT TAGAACTTGT GCTCCCCATT
 GTTGTAATAA ATCTCTCCCC

  Submitted Frequency for ss107938314 back to top
There is no frequency submission for ss107938314.


  dbSNP summary of Genotypes for ss107938314 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938314.


  Submitted individual genotype for ss107938314 back to top
There is no individual genotype data for ss107938314.