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Submitted SNP(ss) Details: ss107938316           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_62_chr1_822781
RefSNP(rs#)rs28765502
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:143

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938316|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AACACTACCA GCTGTGGCAG GGGACAGACA TTGTACGGTG GGGAGGGAAT GGCCTGAGTT
 GGAAATGCCC CGGTTTAGAA CGGGCCTAGG ATGGGCCCCT CATGGTGTTT CCCGAAATCG
 GGTTCCGTTC TTCATCAAAC TTAGAGTGAC ATTGGTTAGC CCAATGATTT CCTTTTTTAC
 ATTTTGGACA TATTTCAGCT
 Y
 AGCAGTTCTC TTTTTTCCCC TATCTGACAG CCGACTCACT GATTTTTTTT CTACATTCTT
 TTTTAGTATG AATAGCTTCT TTAAATTCTT TGAGTAATTT AAAAGGAAAA GGTTCAAATG
 TAGCTATAAT ATCTCCCTGT TGATCTGGGG GGTGTATTCT AACAGGGAAC TGCCAAGCCT
 CTAAATCACC CTCTCTTCTA

  Submitted Frequency for ss107938316 back to top
There is no frequency submission for ss107938316.


  dbSNP summary of Genotypes for ss107938316 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938316.


  Submitted individual genotype for ss107938316 back to top
There is no individual genotype data for ss107938316.