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Submitted SNP(ss) Details: ss107938317           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_63_chr1_824955
RefSNP(rs#)rs72631887
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:134

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938317|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 AGCCCCGTGG CAGATATGGG GACGAGCGGC CAATACATCA GCTCAGGTGT CCGAGGGGTT
 TCAGGGACAT GAGAGAGAGT GGGGAACGAA GGGGGAAATC GCTTGGAGAC CCAGGACGAG
 CCTGGCACAC CAGGATGCTG ATTCTGAAAG GGCGATTAAG GAGATTCCAT GTTTTAAAAA
 TCTGGATTTC TGGCTTCTTC
 K
 GAAAAAAATC AGAAGATGTT TAGCACAACA GCGTGGCATC GTCAGCTGTA CTCCTGCCCC
 ACTGTCCCCC AGGGAGCCTG GCTCATCCCA TGGCTCACAG AGGCCCACAC TGTGGCCAGA
 CAGGTCCACT GATGGCTCAG CACGTGCACC CCGGCTGCAG GGAGATGGGT ACCAGCCCAG
 GAAGTGGGAC ACTGGCTGAA

  Submitted Frequency for ss107938317 back to top
There is no frequency submission for ss107938317.


  dbSNP summary of Genotypes for ss107938317 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938317.


  Submitted individual genotype for ss107938317 back to top
There is no individual genotype data for ss107938317.