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Submitted SNP(ss) Details: ss107938318           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_64_chr1_827077
RefSNP(rs#)rs72631888
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:137

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938318|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 GCCTGTAAAT GGAGCGTTTT ATCTTTTTCG TCAGCTGGTT CATTGAACAA GTGTTTACAG
 AGCACCTGCT AGGCAAATCC ATCGTGACAG AGACTCGGTG TGCCCCCAAG GAGCTCACAG
 TCTAGCGGTA AAGATGGTGC ATAAACTCCC TGACACTCAG GGTGGCAACA GCCACCCCAC
 CTGCTCCTCC CTTTCCTAAT
 S
 CCCACACGGA GCAGACACTC GAGGGCTGCT TTTAGGAGTG CTGACTACAT GCTTCCCTAC
 CTCCATGTAG GCATGTGTGT ACACAAGCGT GTCCTGTTTT CACCTTTTCA CAAAACTATG
 TCAAAAGTGA AACATTTTGG AATACATTTC CAGTTATGCA AAATGTTTAA AATATGAATT
 TCTTCGGTTA ACACAAATTA

  Submitted Frequency for ss107938318 back to top
There is no frequency submission for ss107938318.


  dbSNP summary of Genotypes for ss107938318 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938318.


  Submitted individual genotype for ss107938318 back to top
There is no individual genotype data for ss107938318.