NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss109937240           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_24_chr1_747597
RefSNP(rs#)rs4951929
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:143

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109937240|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGCAGATC CACCCTGTCT ATACTACCTG CCTGTCTAGC AGATCCACCC TGTCTATACT
 ACCTGCCCAT CCAGCAGGTC CACCCTGTCT ACACTACCTC CCTGCCGAGT AGATCCACCC
 TGTCTACACT ACCTGCCTGG CCAGAAGATC CACCCTGTCT ACACTACCTT CCTTGCCAGT
 AATGCACGCT ATCTACACTA
 Y
 CTGCCTGGCT AGCAGATCCA CGCTGTCTAT ACTACCTCCC TGTCCAGTAG ACCCACCCTG
 TCTATACTAC CTCCCTGGCC AGCAGATCCA CCCTGTCTAT ACTACCTGCC TGGCCAGCAG
 ATCCACCCTG TCTATACTAC CTGACTGGCC AGCAGATCCA CCCTGTCTAC ACTACCTGCC
 TGCCCAGAAG ATGCGCCATG

  Submitted Frequency for ss109937240 back to top
There is no frequency submission for ss109937240.


  dbSNP summary of Genotypes for ss109937240 back to top
No sufficient data to compute Hardy-weinberg probability for ss109937240.


  Submitted individual genotype for ss109937240 back to top
There is no individual genotype data for ss109937240.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement