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Submitted SNP(ss) Details: ss109937332           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_44_chr1_775852
RefSNP(rs#)rs2980300
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:137

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109937332|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCCTCTGCAT TCACGTCAAG CTGTGCAGGG AATGCTAAAC AGAGGCAGAT CTAAACTTAG
 GAGTTAGGCT TCTTCTCCAT GGAGATGTGG ATCTGCACAG ACAAAGTGTC CAAGTGGGAT
 TTTCCTGCTA TTTCAAGGAC TGCTGCTGCA CCCTGCTGGC TCTTCCTGCA CTCCCTGCCT
 CCAGGAATGA CTGTGTCTCT
 Y
 TGAGTTAGTG AAGTCATCAA CTTTTTTTTT TAAATCTCTT ATTATTATTA TTATACTTTA
 AGTTTTAGGG TACATGTGCA CATTGTGCAG GTTAGTTACA TATGTATACA TGTGCCATGC
 TGGTGCGCTG CACCCACTAA CTCGTCATGT AGCATTAGGT ATATCTCCCA GTGCTATCCC
 TCCCCCCTCC CCCCACCCCA

  Submitted Frequency for ss109937332 back to top
There is no frequency submission for ss109937332.


  dbSNP summary of Genotypes for ss109937332 back to top
No sufficient data to compute Hardy-weinberg probability for ss109937332.


  Submitted individual genotype for ss109937332 back to top
There is no individual genotype data for ss109937332.

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