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Submitted SNP(ss) Details: ss109937452           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_300012_chr2_20999016
RefSNP(rs#)rs72888855
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:166

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109937452|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ATCATCAACC ACTTGTTTAC ACAGCAGGGC TGATTGACAC GGTTTATTTT TCTGCGGTTT
 TTCGTCTAAT CTAAAGTGAA ATGTGAACTA GTGAATTCAT GGAGTTCCCT TCACCTTTTG
 CAACCCAGAA CCTGCAAGGG AGGTGCTATT GGTCCTTACT GCTGCCCGGT GACTGTTTTC
 ACATGTGTAA ACATCATATG
 Y
 CCTACTCAGA TCTAGTTGCA CCCACCTGAA AGGTCCGGCC AACTATACCC GAAAACTCCA
 GGATCCCTTG TCCTCCCCAG GGAATCAATG GACGAAACAG GACCATTGCC TGTAGAACAT
 GCACCTGGAA AGGAACTCAG AGTTGTCCTG TGTTTTGGAA GCTCTGGGAT CCCTCCTTGG
 GTTCAGATAG CAGTCAGCCC

  Submitted Frequency for ss109937452 back to top
There is no frequency submission for ss109937452.


  dbSNP summary of Genotypes for ss109937452 back to top
No sufficient data to compute Hardy-weinberg probability for ss109937452.


  Submitted individual genotype for ss109937452 back to top
There is no individual genotype data for ss109937452.

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