| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_028054.12_2341833 | | RefSNP(rs#) | rs7339868 | | Submitted Batch ID | CHR20_NA10470_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_028054
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA10470_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45079-907g08.p1cposition:-448quality:42 |
>gnl|dbSNP|ss11100111|allelePos=530|len=730|taxid=9606|alleles='T/C'|mol=Genomic GCTCTGTGGC CTGGGCTGAT GGGTGGGTGG GTGCCTTTAT TTGCCTGGTT GAGGAGTGCA
CTCACTGGGG GCCATTTGGT TTGAAACATT TTTTGCAGCT AAGGGGTGGT AAAGATGACG
CTAGTTTAGC TGAGTTTAAG GCTAATTAAT CAGCCttctt ttttcttttt ctttcctttt
ttttttagac agagtctcac acaattccct gggctggagt gcagtggtgc gatcatggct
cactactgca gcatcaacct cctggactca agcaattctc ctgcctcagc ctcccgagta
gctgggacta taggtgccca acaccattgc cccgctattt ttttattttt tattttttat
tttttgtgga gacagggctt tgccatgttg ctcaggctgg tctcaaactc ctgggcccaa
gtgatcctcc tgcctcagtc tcccaaagtg ccagatttac aggtgtaagc caccgcgccc
agccAAATCA GCCTTCTAAA GAGCTTAATT TTCCATCACT GACTTTGTG
Y
TCTTTTATAC AAAGGTTGCA GACTCCGAGG CTGAAACCCC TTTCTGACCG GTAGCTCTAG
AGTAAACAAA CGCCTGGACT TTCTTCATCC CCTGAAGACA AAGAACTTGT TCATGAGCCT
CTCCAGGCAG CTCGTGGTCT GAGCTGTCAG GAATGACGGA TGAGCAGCTG CTTTTGCCGG
CGCCTCCGCG GCAGCTAAGG
There is no frequency submission for ss11100111.
No sufficient data to compute Hardy-weinberg probability for ss11100111.
There is no individual genotype data for ss11100111.
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