| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_004525.15_1888807 | | RefSNP(rs#) | rs7339878 | | Submitted Batch ID | CHR20_NA10470_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004525
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA10470_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45079-515c02.q1cposition:37quality:35 |
>gnl|dbSNP|ss11100121|allelePos=511|len=713|taxid=9606|alleles='T/C'|mol=Genomic TGCTGGCAAC TCACGAGAGG ATGCCTGCTG TCAGCATCAC CCTCCTTGAT GTGACGTAAG
AAGAAACTGA GACCTTCAGT CCAGCTCCAT GATCTGCAGG GTATAGTGCA AGGAAGAGGA
AGAGAGGGGA AAACTAGGCT TCCTAGCCGT CGAACTCAGC CTTTTCCAAG GCCATACATC
ACCTTCTACT ATTAGTATCA tttatttatt tatttttgag acggggtctc actctgttac
ccaggctgga gcgcagtgac gcgattatag ctcactgcgg cctcaacctc cccaggctca
agtgatcctc ccactcagcc tcctaagtag ctgggactac acacgcacca ccatgcctgg
ctaatttttt tttttttttt tttttttttt tttttagtag agacagggtt ttgccctgct
gcccaagctg gtctcaaaca cctgggctca agggattcgc ctaccttggg cttccaaaat
gctgggatta caggcataaa ccaccgtgcc
Y
ggTTCTATTA GTACTTTTAT AAACAGCATC TAGGACAAGT GAGCAAGTGA CAACAAATCA
CGCCAGGTGG CACCCCCAGC CAGCCGGCCA GCGCCACATC CAAGCGCACC GAGGCATCCT
TACTGAGCCC TGAACACAGC AGTGACCCCG ATGGGCCTGT GCCATGAGGC CCACATTCCA
CTGAGGGGAG ACAGACATAA GC
There is no frequency submission for ss11100121.
No sufficient data to compute Hardy-weinberg probability for ss11100121.
There is no individual genotype data for ss11100121.
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