| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_077387.2_169461 | | RefSNP(rs#) | rs4126164 | | Submitted Batch ID | CHR20_NA10470_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077387
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA10470_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45079-236g10.p1cposition:-79quality:42 |
>gnl|dbSNP|ss11100123|allelePos=440|len=2178|taxid=9606|alleles='C/T'|mol=Genomic AAAGAAATTA AGTGTGTCTT GTAAGCCTGG CGTCTGATCA TGTCTTAGAG GAAGTAAGGT
ATAAGCTGGC CAGAGACTCC TTTGTGACAC AAAAGGTGAA GTTACAGACA TTCCACTAAA
TTTAATTTTT ATTATGACAT AAGATAACTG GTAATATGCA ACATGATTGA AAAAAACTTC
TCATTCAATT CGATTGGGCC ttgacataag aatagacata aacaagctaa gaattgacaa
tctaaaaata agcctgcact tttacagtca attgatttta tacaagctta acaaaagaac
aaaatgggaa aagaatagtc ttttcaacaa atggtgctgg gacaactggg tatccataag
caaaaaataa ataaagttcg accaaatatc ttatttaata attaactcaa aataaaatag
ttaactgtaa aagctaaaa
Y
tataaaaccc tcagaagaaa acactggcat aaatctttgt gactgcattt gccagtgttt
tcttagctat gactccaaag gaaaaatgga ttcaatggac ttcaaaattg aaaactgctg
tgcctcagaa gacagtatga agaagtgaaa aggtaagacg ccaagtagaa gaaagtattt
gaaaagcgtg tatctgataa gggacttaca tatataggaa atataaataa ctcttgcaat
taataaataa caagataagc caattttaaa aaatgggcaa agattttgaa tagatatatc
tgcaaagaag atataaagat ggataagcac attaatagat gcttaatgta attagtcatt
aggaaaatgt aaatcaaaac cacatgtggt atcacttcac accacaggat aaaatctttg
ttcaagaaaa aagagtgtta ggaaaaatgt aaagaaatta aaacctttat ctaatgctgc
tgggaatgta aagtgatgca gccactttgg aaaacaaact ggcagctcct taaagggtta
agcatgaagt taccatatga cacagaaatt ccagtcataa gtatatactc cagaaaaata
aaaacatacg caaacacaaa aactcataca taaatgttta cagcagcatt attaatagta
gtcaaaaggt ggaaagaacc agaacgtctg tcacctttgg gtgggagaga acccaaaggt
ccatcacctg gcgaatggat aaataaaatg tttgatgtat ccatacaatg gaatattact
cagcaataag aagaaattaa gtacagatac CGTATTAGGa ggagacagca aaatgcctag
gcagatacgg aagggtcccc ggagaatctc caaccagccc cacaagtgtt tacaccagat
gttatgtgca gataagggaa cctggacttg tcttgcctgg acatgcccac agcagaccgg
aggcccacat gcagtggggg gatggggtgg agtcaccagg aattcacgcc ttatgcagag
gaggagcctg gccgcttcag ctcatgtgat cctggtattc aattgtgagg tggaaacctc
tttgcaggac ccctctcttt gctgagagct gtcctttcac ataataaatt ctgccctcct
caatgtgtct gcatgcttaa tttttcctgg tcacgagaga agaacccaga tgtagctgaa
ctaaggagca aaaacccggc atcaatacct gctacagcac agatgcagca tgaaaaatta
tgctaagtga aataagccag tcccagcaga ccacttgctt tttatttcag aggcttatag
gcaaatctat acaaagaagg tgggtggttc cctagggctg agggaggaag ggaaagctag
tgaagatggc taaatgacgt ggggtttgtt tttagggtga tgaaaatgtt ctaaaattaa
ttgtaatgat gatggcatag ctctctgaaa atactaaagt taatgaattc tatactttaa
atgagtgaat tgcatggcgt gttcattatt tctcaataaa cctgttaCCC CCCACCCCAA
ATTAATTTGG TACTAGAGAT CTGCAGATAG GTACTGCTTG GTTTCAAATC ACTGGCCAGG
GTTCAAGGTC TAAGAGAATC AACAACATGT CCTTTTTATA GAAAAAGAGA TTTATATTTT
ACAAGCTATC CTTTTCATTA GTATCAAGTC TGTAAAATTC AATGAAAAAT CTTTCTTT
There is no frequency submission for ss11100123.
No sufficient data to compute Hardy-weinberg probability for ss11100123.
There is no individual genotype data for ss11100123.
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