Submitter | Handle | SC_SNP | Submitter SNP ID | chr1.NT_004668.15_1866349 | RefSNP(rs#) | rs7349067 | Submitted Batch ID | CHR20_NA07340_200306 | Submitted Date | Jul 03, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004668
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA07340_200306 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | T/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:20SNP44340-75h06.p1cposition:405quality:34 |
>gnl|dbSNP|ss11111814|allelePos=902|len=5074|taxid=9606|alleles='T/G'|mol=Genomic TGGGTACACA CTTTTGAAGC CTCCTTCCTG GGCCATTCAC CTAGAGCTAT TAATACCTCA
CACTTCATTT TTGAATTGTT CCTATCTTCA CAAATTCTGG CCTGCCAATT TATGTTTCTT
GGTAGTCTAG GACATGATGC TGCACACTAT ATTTTAGATG TAACTTATTT TCAAAATTAA
CTTCACTGTG GTAAAGTACC acataaaatt caatgcatgt tttttatata tacatttttg
agttttgaaa aatttaccat gtagccatca tcataaccaa tatatagaac atttctgtca
ccctaaaaag ttactgtgtg tcctttccaa gaaaataaat tgcctgtcat ccacagcctc
agagaagaaa caactgatct gcttcctgtt atatattaag tttgcttttc tagaagttca
tatacatgaa aagaaagaat atgtatttta ttgtacggct tcattcacac agcataaatc
tgagaatcat tcacattgcc acatttcttt ttactgttcc tttttactat tcacatattt
ctttttacaa ctgaattata tgaatatacc acaatttctt tacatattca cctggaaatc
tgcgttgttt ccagttttta gtcataaaga aaaaatatcc tatgaacatg tgtgcacatg
acattttgtt taaacatatt ttcatttctc ttgggtgaat acctaagact ggaattacta
aatctttttt tttttttttt ttttttgcga cggagtctcg ctctgtcact caggctggag
ggcagtggcg tgatcttggc tcactgcaac ctctgcctcc cgggttcaag tgattctcct
gcctcagcct cccgagtagc tgggactaca ggcacctgcc accatgcctg gctaattttt
g
K
ttttagtaga gatagaattt caccatgttg gccaggctgg tctcgaattc ctgacctcaa
atgatccacc tgccttggcc tcccaaagtc ctgggattac aggtgtgagc cactgcaacc
tgcctagaat tactaaatca actaattgta tgtttaagaa atttttacaa agtgattgtt
ctattttata gtcccatcat caatgactga gttaaagatc ctatacatcc tcaccaagac
ttggtattat gcagtctttt acattttaat cattctaatg ggtgtgttct catttataaa
tttaatttgc atttccctga tgttgagcat attttcatga gcttattggc aattcatatg
cattcttttg agaaaattct attcagatct tttgccgatt atttttattg ggttctttta
ttttttgGCT TACATTTTCA TTTTCTTAAA TAATGttttc tgtttgtttg ttttctgaga
tgaagtctcg ctttatcacc caggccggag tacagtggtg caatcttggc tcactgcaac
ctccacctcc cggggttcac gggattcctg tgcctcagcc tcctgaggag ctgagattac
aggtgcctgc cactacgccc ggctaatttt tttgtatttt tagtagagac ggggtttcac
cgttttagcc gggatggtct cgatctcttg acctcgtgat ccgcccgcct cggcctccca
aagtgctggg attacaggcg tgagccaccg cgcccggccA AGTCAAATTT TTTTAAATGG
TCCTtgcttt ttatactatt taagaaatct ttgaccatcc cccaaggtct taaagatttt
ttcctattct tctaaaagtt ttattatttc cgaaatttca taggggtata tgatcttttt
tgatttaaat ttttcatgtg gtatgaaaca gggtcagtga tctttttatt ccataaggat
atccagtagt tacagcacca tttgttgaaa agactatcct tgtcccattg aaatagtcac
atttgtcaaa aatcaattga AAGTTAGcgg agtttcactc ttgttgccca ggctggagtg
caatagcgtg atcactgctc actgcaacct ccacctccca ggttcaagca attctcctgc
ctcagcctcc cgagtagctg ggattacatg cacccaccac catgcccagc taatgttttg
tatttttagt agagatgggg ttttgccatg ttggccaggc tggtctcgaa ctcctgacct
caggtgatct gcccacctca gcattccaaa gtgctgagat tacaggggtg agccactaca
cctggtctaa atttcatttt taataattaa aaaaaaataa GCCACGAAGT GTCtgtcgcc
caggctggtc tttaacttct gggctcaagt gatcttcctg cagtggcctc cgaaagtgct
gcgattatgt gtgagccacc acggctggcC tctatgtaaa ttttagaatc agtctgccag
tttatattaa aatcctgttg caactgtatt gagtccactg actctacaga gtgatctgga
gaaaggtgac atctcaacaa taatgagtct ttcaaaaatg cctctgacat atctctccca
cttattcttc aatttttctc aaaaagactt tgtatttttT TAATTTTTTG TGATTTAATT
TTAATTTTAG TGAGTACATA GATtgtgtgt gtgtgtgttt gtgtgtgtgt ACAtttttta
ttttttattt tttccctaag ggacaaggtc tcactgttac ccacactggt ctgaatctcc
tggccccaaa tgatcttcct gcctcattcc cccatgttgc taggactaca ggcatgaacc
actgggccta cactgtactt tttttttttt tttttttggt atttttagta gagacggggt
ttcaccatgt tggccaggct ggtctcgaac tcctgacctc aaatgatcca tctgcctcgg
cctcccaaac tgctgggatt acaggcgtga gccaccgcac ccggccACtg tactttttat
tatacagatc ccgtacatgt ttttctaaat ttatcgttaa gactttaatg gcttttaata
caactgtaaa tagtattatt tATATTTCAA TTAATTAATT AAAttttttt tttttttttt
tgagacaagg tcttgctctc atccaagctg gagtgcagtg gcatgatctt ggttcactgc
aacctccacc tcccgggttc aagcaattct catgtctcag cctcccgagt agctgagact
acaggtgtgc ggcaccacgc ccggctaatt tttgtaattt ttgcagagat ggggtttcac
catgttgcct agactggtct ggaacttctg ggctcaagcg atccacacac ttctgtctcc
caaagtgctg gtattacagg tgtgagccac catgcctggc tACATTTCAG TTTCtttttt
ttttttttct tttttttttt ttgagacgga gtctcgctct gtcgcctagg ctggactgca
gtggcgcgat ctcggctcac tgcaagctcc gcctcctggg ttcacaccat tctcctgcct
cagcctcccc agcagctggg acttcaggcg cccgccaccg cgcccggcta attttttttg
tatttttagt agagacgggg tttcatcgtg atcctgacct cgtgatccgc ccgcttcggc
ctctcaaagt gctgggatta caggcgtgag ccaccgcgcc cggcGCTACa tttcagtttc
taattgttca ctgtatgtag aaatacaatt atttctatat gttgagctta aacacacaga
aattgtactg ttaaactcat ttattaagtt ccagcaactt tttaacaaat tccttgggaa
ttttctgcaa attgtattat ttctgaataa gacaTtaaga cttccctata atgctgaata
gaagtagtgg acatctatac cttttcccca atcttaggga ggaagctttc agtctttcaa
cattaagtgt taggttagct gtaggttttt ctgcaaacac cctgtaatgg gttgagcaaa
tactattcta gtcttatttt ctaagagctt ttttttaaaa accatgaatg gatgtcaaat
tttgtcaaat atgttccctt aatctactta gacaattagg tgatttttct catgtattGT
TTTTCttaaa aaatattaat ttattaattG ATTTGAGACT GGGTTATGAG Actggctaat
ttttatattt ttggtagaga cggggtttca tgtgttgctc aaggctggtc tcgaactcct
gagctcaggc aatccgcatg cctcaggctc ccaaagtgac aggattacag gagtgaacca
ccacactcag ccttgttact gcctgtcttt tgggtataaa ccattttacc tggggtgaga
tgatatctca ttgtagtttt gatttgcatt cctctgataa tcaatgatgt tgaataccta
tgcctgttgc catttgtagc atcttctttt gagaaatatc tcttcagtct tttgtccatt
ttttaaacag attattagac ttttacctat agagtggttt gaatttacat attctggtta
tgaacacttt gtcagatgtg tagtttgcaa atattttctc ccattctgtg ggttgtctct
tcactttatt gattgtatac tttgctgtgc agaagctttt ttacttgatt tgatcacatt
tatccatatt tgtttggctg cctgtgcctg tggggtattg ctcataaatt tttgttcaga
tcaatatccg ggagagtttt cccaatgttc tcttatagta gtttcatact tttgagatct
tagatttaag cctttcatcc attttgattt cagtttttgt atgtgctgag agacaggggt
caagtttttc ttttgcatat gaatatccag tattcccagc actatttatt gaagagactt
tatgctcttg ggacctttgt caaaaataag ttcactgtag gtgtgtggat ttgtttctgg
gttctctctc ctgttccact ggtctatgtg tctattttta tgctagtacc atgctgtttt
ggttatcata gctctgtagc ataactgaag tcaggtaaag ttatttctcc ctttcagctt
agaaatagct ttggctattc tgggtTAATT TT
There is no frequency submission for ss11111814.
No sufficient data to compute Hardy-weinberg probability for ss11111814.
There is no individual genotype data for ss11111814.
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