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Submitted SNP(ss) Details: ss11111814           
Submitter
HandleSC_SNP
Submitter SNP IDchr1.NT_004668.15_1866349
RefSNP(rs#)rs7349067
Submitted Batch IDCHR20_NA07340_200306
Submitted DateJul 03, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA07340_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP44340-75h06.p1cposition:405quality:34

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11111814|allelePos=902|len=5074|taxid=9606|alleles='T/G'|mol=Genomic
 TGGGTACACA CTTTTGAAGC CTCCTTCCTG GGCCATTCAC CTAGAGCTAT TAATACCTCA
 CACTTCATTT TTGAATTGTT CCTATCTTCA CAAATTCTGG CCTGCCAATT TATGTTTCTT
 GGTAGTCTAG GACATGATGC TGCACACTAT ATTTTAGATG TAACTTATTT TCAAAATTAA
 CTTCACTGTG GTAAAGTACC acataaaatt caatgcatgt tttttatata tacatttttg
 agttttgaaa aatttaccat gtagccatca tcataaccaa tatatagaac atttctgtca
 ccctaaaaag ttactgtgtg tcctttccaa gaaaataaat tgcctgtcat ccacagcctc
 agagaagaaa caactgatct gcttcctgtt atatattaag tttgcttttc tagaagttca
 tatacatgaa aagaaagaat atgtatttta ttgtacggct tcattcacac agcataaatc
 tgagaatcat tcacattgcc acatttcttt ttactgttcc tttttactat tcacatattt
 ctttttacaa ctgaattata tgaatatacc acaatttctt tacatattca cctggaaatc
 tgcgttgttt ccagttttta gtcataaaga aaaaatatcc tatgaacatg tgtgcacatg
 acattttgtt taaacatatt ttcatttctc ttgggtgaat acctaagact ggaattacta
 aatctttttt tttttttttt ttttttgcga cggagtctcg ctctgtcact caggctggag
 ggcagtggcg tgatcttggc tcactgcaac ctctgcctcc cgggttcaag tgattctcct
 gcctcagcct cccgagtagc tgggactaca ggcacctgcc accatgcctg gctaattttt
 g
 K
 ttttagtaga gatagaattt caccatgttg gccaggctgg tctcgaattc ctgacctcaa
 atgatccacc tgccttggcc tcccaaagtc ctgggattac aggtgtgagc cactgcaacc
 tgcctagaat tactaaatca actaattgta tgtttaagaa atttttacaa agtgattgtt
 ctattttata gtcccatcat caatgactga gttaaagatc ctatacatcc tcaccaagac
 ttggtattat gcagtctttt acattttaat cattctaatg ggtgtgttct catttataaa
 tttaatttgc atttccctga tgttgagcat attttcatga gcttattggc aattcatatg
 cattcttttg agaaaattct attcagatct tttgccgatt atttttattg ggttctttta
 ttttttgGCT TACATTTTCA TTTTCTTAAA TAATGttttc tgtttgtttg ttttctgaga
 tgaagtctcg ctttatcacc caggccggag tacagtggtg caatcttggc tcactgcaac
 ctccacctcc cggggttcac gggattcctg tgcctcagcc tcctgaggag ctgagattac
 aggtgcctgc cactacgccc ggctaatttt tttgtatttt tagtagagac ggggtttcac
 cgttttagcc gggatggtct cgatctcttg acctcgtgat ccgcccgcct cggcctccca
 aagtgctggg attacaggcg tgagccaccg cgcccggccA AGTCAAATTT TTTTAAATGG
 TCCTtgcttt ttatactatt taagaaatct ttgaccatcc cccaaggtct taaagatttt
 ttcctattct tctaaaagtt ttattatttc cgaaatttca taggggtata tgatcttttt
 tgatttaaat ttttcatgtg gtatgaaaca gggtcagtga tctttttatt ccataaggat
 atccagtagt tacagcacca tttgttgaaa agactatcct tgtcccattg aaatagtcac
 atttgtcaaa aatcaattga AAGTTAGcgg agtttcactc ttgttgccca ggctggagtg
 caatagcgtg atcactgctc actgcaacct ccacctccca ggttcaagca attctcctgc
 ctcagcctcc cgagtagctg ggattacatg cacccaccac catgcccagc taatgttttg
 tatttttagt agagatgggg ttttgccatg ttggccaggc tggtctcgaa ctcctgacct
 caggtgatct gcccacctca gcattccaaa gtgctgagat tacaggggtg agccactaca
 cctggtctaa atttcatttt taataattaa aaaaaaataa GCCACGAAGT GTCtgtcgcc
 caggctggtc tttaacttct gggctcaagt gatcttcctg cagtggcctc cgaaagtgct
 gcgattatgt gtgagccacc acggctggcC tctatgtaaa ttttagaatc agtctgccag
 tttatattaa aatcctgttg caactgtatt gagtccactg actctacaga gtgatctgga
 gaaaggtgac atctcaacaa taatgagtct ttcaaaaatg cctctgacat atctctccca
 cttattcttc aatttttctc aaaaagactt tgtatttttT TAATTTTTTG TGATTTAATT
 TTAATTTTAG TGAGTACATA GATtgtgtgt gtgtgtgttt gtgtgtgtgt ACAtttttta
 ttttttattt tttccctaag ggacaaggtc tcactgttac ccacactggt ctgaatctcc
 tggccccaaa tgatcttcct gcctcattcc cccatgttgc taggactaca ggcatgaacc
 actgggccta cactgtactt tttttttttt tttttttggt atttttagta gagacggggt
 ttcaccatgt tggccaggct ggtctcgaac tcctgacctc aaatgatcca tctgcctcgg
 cctcccaaac tgctgggatt acaggcgtga gccaccgcac ccggccACtg tactttttat
 tatacagatc ccgtacatgt ttttctaaat ttatcgttaa gactttaatg gcttttaata
 caactgtaaa tagtattatt tATATTTCAA TTAATTAATT AAAttttttt tttttttttt
 tgagacaagg tcttgctctc atccaagctg gagtgcagtg gcatgatctt ggttcactgc
 aacctccacc tcccgggttc aagcaattct catgtctcag cctcccgagt agctgagact
 acaggtgtgc ggcaccacgc ccggctaatt tttgtaattt ttgcagagat ggggtttcac
 catgttgcct agactggtct ggaacttctg ggctcaagcg atccacacac ttctgtctcc
 caaagtgctg gtattacagg tgtgagccac catgcctggc tACATTTCAG TTTCtttttt
 ttttttttct tttttttttt ttgagacgga gtctcgctct gtcgcctagg ctggactgca
 gtggcgcgat ctcggctcac tgcaagctcc gcctcctggg ttcacaccat tctcctgcct
 cagcctcccc agcagctggg acttcaggcg cccgccaccg cgcccggcta attttttttg
 tatttttagt agagacgggg tttcatcgtg atcctgacct cgtgatccgc ccgcttcggc
 ctctcaaagt gctgggatta caggcgtgag ccaccgcgcc cggcGCTACa tttcagtttc
 taattgttca ctgtatgtag aaatacaatt atttctatat gttgagctta aacacacaga
 aattgtactg ttaaactcat ttattaagtt ccagcaactt tttaacaaat tccttgggaa
 ttttctgcaa attgtattat ttctgaataa gacaTtaaga cttccctata atgctgaata
 gaagtagtgg acatctatac cttttcccca atcttaggga ggaagctttc agtctttcaa
 cattaagtgt taggttagct gtaggttttt ctgcaaacac cctgtaatgg gttgagcaaa
 tactattcta gtcttatttt ctaagagctt ttttttaaaa accatgaatg gatgtcaaat
 tttgtcaaat atgttccctt aatctactta gacaattagg tgatttttct catgtattGT
 TTTTCttaaa aaatattaat ttattaattG ATTTGAGACT GGGTTATGAG Actggctaat
 ttttatattt ttggtagaga cggggtttca tgtgttgctc aaggctggtc tcgaactcct
 gagctcaggc aatccgcatg cctcaggctc ccaaagtgac aggattacag gagtgaacca
 ccacactcag ccttgttact gcctgtcttt tgggtataaa ccattttacc tggggtgaga
 tgatatctca ttgtagtttt gatttgcatt cctctgataa tcaatgatgt tgaataccta
 tgcctgttgc catttgtagc atcttctttt gagaaatatc tcttcagtct tttgtccatt
 ttttaaacag attattagac ttttacctat agagtggttt gaatttacat attctggtta
 tgaacacttt gtcagatgtg tagtttgcaa atattttctc ccattctgtg ggttgtctct
 tcactttatt gattgtatac tttgctgtgc agaagctttt ttacttgatt tgatcacatt
 tatccatatt tgtttggctg cctgtgcctg tggggtattg ctcataaatt tttgttcaga
 tcaatatccg ggagagtttt cccaatgttc tcttatagta gtttcatact tttgagatct
 tagatttaag cctttcatcc attttgattt cagtttttgt atgtgctgag agacaggggt
 caagtttttc ttttgcatat gaatatccag tattcccagc actatttatt gaagagactt
 tatgctcttg ggacctttgt caaaaataag ttcactgtag gtgtgtggat ttgtttctgg
 gttctctctc ctgttccact ggtctatgtg tctattttta tgctagtacc atgctgtttt
 ggttatcata gctctgtagc ataactgaag tcaggtaaag ttatttctcc ctttcagctt
 agaaatagct ttggctattc tgggtTAATT TT

  Submitted Frequency for ss11111814 back to top
There is no frequency submission for ss11111814.


  dbSNP summary of Genotypes for ss11111814 back to top
No sufficient data to compute Hardy-weinberg probability for ss11111814.


  Submitted individual genotype for ss11111814 back to top
There is no individual genotype data for ss11111814.

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