| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_077386.2_3429774 | | RefSNP(rs#) | rs7349069 | | Submitted Batch ID | CHR20_NA07340_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077386
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA07340_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP44340-923h11.p1cposition:-284quality:29 |
>gnl|dbSNP|ss11111816|allelePos=342|len=677|taxid=9606|alleles='C/T'|mol=Genomic CCAGGTGTGG TCCTGCCGAA ATTTAGACTA TCAGGACAAA CCCAAGGCAG AGGAGGAGGA
CGAAGGACAT GTGATGTTTG ACATACTCTT TGCAGGGCTT TGTGCTTGGC ACTTCACATA
TGGGATCTTG ATGTAagtgc agccattccc atttcccaga tgaggaaact gagacttaga
aaagggaagt tacttgcccc aagctcaTTT TTTCCCTGCC CCGCGGTGCT ATGCAAGGAG
CAAACCCAGA CTCTAGTTTG AGTTCCAGGG AAgtaagtta ctcacttccc ttctctcagc
ctcactttcc ccatccagaa aatgggaata atactttctg c
Y
tctcaggtgg ttgtgaTTTC TTTTCACATC CCTTCACTCA ACAGATATTT ACAGAAGGTC
TCCTCTGTGT CAGCCTCTGC TCTAGGCCCC AGAGACACAG CAGTGAACGA GATGTGCCCA
GTTCTTGCTC CTAGGAGTCT GATTCTTTTG GGTAATGCCT GTCAGGTGCT CCACAGGGGC
CAGCACTTAG TGAGTGCTTG GGGAACCTTA TGGGGATAAG AATATAGGAT TGAATGGGAT
GGTGTGCAGA ATGGGCTTGG CCTGTAAGAG GAGCTCACTT TGGCATTCAT TTCTTAATCA
CTATGCCAGT GATTCTCTAC CCTGCCAGTG GTGGT
There is no frequency submission for ss11111816.
No sufficient data to compute Hardy-weinberg probability for ss11111816.
There is no individual genotype data for ss11111816.
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