| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_004610.15_1315058 | | RefSNP(rs#) | rs6426617 | | Submitted Batch ID | CHR20_NA07340_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004610
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA07340_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP44340-2149h05.q1cposition:-247quality:29 |
>gnl|dbSNP|ss11111830|allelePos=493|len=693|taxid=9606|alleles='C/G'|mol=Genomic TTTCGCAAGC AAAACAACGT TTTGAAATAG CCATTGAGAA GAAAGGAGAg gctgggcgag
gtggctcatg tctgtaatct cagcactttg ggaggctgag gcgggaggat cacttgagcc
caagacttca agaccaccct cagcaacatg gcagaacccc attctacaaa aaataataaa
aattagccaa gcatggtggt gcacgcctgt agtcccagct acaagggagg ctgagctggg
gaggtccagg ctgcagtgag ctgtgattgc accactgcac tccagcctgg gtgaaggggc
gagaccctgt ctccccttaa aaaaggaaga aaaagaagaa aGGAGGGAGA GAGAACCCAG
TGGTCGGTTG GGGATGGAAG TGCAGGGCTG AGAGTCTAAC TGAGGTTAGA GACCTCGTGT
TTCTGTTACA CCAAGGTGTG TGGCTGGCCA AGACTTCTTC AATACCCGTG TGTAGGTGGA
CTGGTTTGGC TT
S
AGGTTTCATC AGATGGAAGG AGAGTAGGAC TCGGGCAGGG AGGATCCTTT TGAGAATGCC
GAGGTAATGG GCCAGGATAG GGAAGAAGCA GATTGATATC GAGGGGGAAA GCGGAGACAG
CAATGGACAG GAAACCCAAA GATGGTGAAA AACAGATACA GCGGAAGTGA CTCAAGTGGC
TGGAAGTGGA AGAGATTGTG
There is no frequency submission for ss11111830.
No sufficient data to compute Hardy-weinberg probability for ss11111830.
There is no individual genotype data for ss11111830.
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