Submitter | Handle | SC_SNP | Submitter SNP ID | chr1.NT_004610.15_1697433 | RefSNP(rs#) | rs6426641 | Submitted Batch ID | CHR20_NA07340_200306 | Submitted Date | Jul 03, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004610
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA07340_200306 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:20SNP44340-2642h02.q1cposition:345quality:48 |
>gnl|dbSNP|ss11111832|allelePos=201|len=2487|taxid=9606|alleles='A/G'|mol=Genomic CTGGGTGGAA AAGAGACTGG AAGAATAGGC TGCCCTGTGG AAGAGGACAG CATGTAAGTG
ACACGGCACC ATGACCTCTT GTCCAGAGGA AGCTTCTCGG CTCTAATGGA GTCTGGGGCC
TTGTCCAGAA AGGTCCGGCA TCCTGGGGTG GGGAATTCTG CCCCTCCACG GCTTTCCCAG
CAGGCAGAGG AGAGACATCT
R
TCTATCTAGG ACCTAACGTG CTCTGGAAAT TGGACTGCAA GCCAGGGTTC CACATCCCTC
ATTCATTCAA CTTTCTTTCA TTATTGAAtt tttttttatt gatatgtaat agatgtacat
acttgagcgg gtacatgtga tcatttgata cgtatagttt gtaaagatca aattagggta
attggatgcc cattgcctta aatattcaca ttttcttcat gataggaatg ctgtaattat
tctcttccag ctattttgaa atgtacaata gattaacgtt aactatagtc accctactaa
tctatcaaac actaggtctt attttttcta tctaattgta tatttgtacc taccaatcaa
gctctcttca ttcctcctcc ccctgtatct ttcctggcct ctggtaacca ccaatctact
ctccgtcttc atgagctcta cttttttttt tttttttttt tttgagacag agtcttgctc
tgtcacccag gctggagtgt gctgtcacga tctcagctca ctgcaacctc tacctcccag
gttcaagcga ttctcctgtc tcagcctccc gagtagttag gactacaggt acatgccacc
acacctggtt aatttttgta tttttagtag agacgggatt tcaccatgtt ggtcaggctg
gtctcaaact cctgacctga ggcaatccac ccgcctcggc ctcccagagt gctgggatta
caggtgtgag ccactgcgcc cagccgagat ctacttcttt taactcccac gtatgagtga
aaatacgcaa tatttgtctt tctgtgcttg gcttatttcc ttaacatgat ggcctccagt
tccatccatg ttgctgaaaa tgacaggatt tcattctttt tatggctaaa taatattcca
ctgtgtatac aaaccacaCt tttttttttt gagaccgagt cttgctctgg cacccaggct
ggcatgcagt ggcacgacct cggctcactg caacctctgc ctcctgggtt caagtgattc
tccttctcca gcctcccagg tagatgagat ttcaggtgcc cgccaccatg cctggctaat
ttttgtattt ttagtagaga cggggtttca ccacgttggc caggctggtc tcaaactcct
gagctcaaga atgtatcaag agctcaaaca attcaatagc aaaataataa taataataat
tctatttaaa aatgggcaaa agatctgaat agacatttct caaaagaaga ccctacaaat
ggccaacaga tacatgaaaa tacgcttaac atcactgatc ataagaaatg caaatcaaaa
ctgcaatgag atatcatctt accctagtta aaatggcttt catcaaaaag gctgggaatc
atggatgctg gcaaagatag ggaaaaaggg gaatgctcgc ttgcacactg ttggtggtaa
tgtaaattag tatagccact atggaaaaga gtatagagat tcctcaaaaa ctaaaaatag
aactaccata tgatccagta attcttaaag aacaggaatc aatatatcaa agatatatct
gcactcccat gtttattgta gcactattca caataaccaa gatatggaat taaATTTCTT
TGATCAATAT CATATTGAGT GCCTACTACA TGCCAGGCAC CGTCCCAGTG TGAAGGAGGC
AGTGGTGAAT GAACTGCAGA AAGCCCTTTG CCCTTGGGAG GCACATCCTG GTGAGGAGAG
ACCAACAATA AACAAGAGGC TTAATAAATG TGTAAATTAC ATTAGAAGTG ACACATGCTA
TTAGGTGAGG GGGGTGAGGA AAAGTAGAGA GGTGTAAGGA AAGTGAGTGC CTCCCCACTC
CCCTGGTCCC ATGAAATGGA AAATTCTAAG ATTATCAAAT CTCTGGGCTA GAAACAGCAG
TCAtggcaga gactgactag atgttcacca aacctatcac ctcttcttcc agagccaaag
caacacattt cccaggttcc tttgcagcta gctgcagcca tgtgactaag ttctagccaa
taggatgtga gactctttca aacctggccc ataaatactt cccactccct cagttccccc
atcccctgag caagacttgt tccgtctttc cccatctgct agctgaatgg aggggacact
gaggacctag aggagggcag agccacaggt agaaggggac tgggtccctg aagaccacat
agagaggtga gcccctggcc cccacctgTT AGACTTTACG GGGAGGCACG GCTCATCACT
GTGCGT
There is no frequency submission for ss11111832.
No sufficient data to compute Hardy-weinberg probability for ss11111832.
There is no individual genotype data for ss11111832.
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