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Submitted SNP(ss) Details: ss11111832           
Submitter
HandleSC_SNP
Submitter SNP IDchr1.NT_004610.15_1697433
RefSNP(rs#)rs6426641
Submitted Batch IDCHR20_NA07340_200306
Submitted DateJul 03, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA07340_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP44340-2642h02.q1cposition:345quality:48

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11111832|allelePos=201|len=2487|taxid=9606|alleles='A/G'|mol=Genomic
 CTGGGTGGAA AAGAGACTGG AAGAATAGGC TGCCCTGTGG AAGAGGACAG CATGTAAGTG
 ACACGGCACC ATGACCTCTT GTCCAGAGGA AGCTTCTCGG CTCTAATGGA GTCTGGGGCC
 TTGTCCAGAA AGGTCCGGCA TCCTGGGGTG GGGAATTCTG CCCCTCCACG GCTTTCCCAG
 CAGGCAGAGG AGAGACATCT
 R
 TCTATCTAGG ACCTAACGTG CTCTGGAAAT TGGACTGCAA GCCAGGGTTC CACATCCCTC
 ATTCATTCAA CTTTCTTTCA TTATTGAAtt tttttttatt gatatgtaat agatgtacat
 acttgagcgg gtacatgtga tcatttgata cgtatagttt gtaaagatca aattagggta
 attggatgcc cattgcctta aatattcaca ttttcttcat gataggaatg ctgtaattat
 tctcttccag ctattttgaa atgtacaata gattaacgtt aactatagtc accctactaa
 tctatcaaac actaggtctt attttttcta tctaattgta tatttgtacc taccaatcaa
 gctctcttca ttcctcctcc ccctgtatct ttcctggcct ctggtaacca ccaatctact
 ctccgtcttc atgagctcta cttttttttt tttttttttt tttgagacag agtcttgctc
 tgtcacccag gctggagtgt gctgtcacga tctcagctca ctgcaacctc tacctcccag
 gttcaagcga ttctcctgtc tcagcctccc gagtagttag gactacaggt acatgccacc
 acacctggtt aatttttgta tttttagtag agacgggatt tcaccatgtt ggtcaggctg
 gtctcaaact cctgacctga ggcaatccac ccgcctcggc ctcccagagt gctgggatta
 caggtgtgag ccactgcgcc cagccgagat ctacttcttt taactcccac gtatgagtga
 aaatacgcaa tatttgtctt tctgtgcttg gcttatttcc ttaacatgat ggcctccagt
 tccatccatg ttgctgaaaa tgacaggatt tcattctttt tatggctaaa taatattcca
 ctgtgtatac aaaccacaCt tttttttttt gagaccgagt cttgctctgg cacccaggct
 ggcatgcagt ggcacgacct cggctcactg caacctctgc ctcctgggtt caagtgattc
 tccttctcca gcctcccagg tagatgagat ttcaggtgcc cgccaccatg cctggctaat
 ttttgtattt ttagtagaga cggggtttca ccacgttggc caggctggtc tcaaactcct
 gagctcaaga atgtatcaag agctcaaaca attcaatagc aaaataataa taataataat
 tctatttaaa aatgggcaaa agatctgaat agacatttct caaaagaaga ccctacaaat
 ggccaacaga tacatgaaaa tacgcttaac atcactgatc ataagaaatg caaatcaaaa
 ctgcaatgag atatcatctt accctagtta aaatggcttt catcaaaaag gctgggaatc
 atggatgctg gcaaagatag ggaaaaaggg gaatgctcgc ttgcacactg ttggtggtaa
 tgtaaattag tatagccact atggaaaaga gtatagagat tcctcaaaaa ctaaaaatag
 aactaccata tgatccagta attcttaaag aacaggaatc aatatatcaa agatatatct
 gcactcccat gtttattgta gcactattca caataaccaa gatatggaat taaATTTCTT
 TGATCAATAT CATATTGAGT GCCTACTACA TGCCAGGCAC CGTCCCAGTG TGAAGGAGGC
 AGTGGTGAAT GAACTGCAGA AAGCCCTTTG CCCTTGGGAG GCACATCCTG GTGAGGAGAG
 ACCAACAATA AACAAGAGGC TTAATAAATG TGTAAATTAC ATTAGAAGTG ACACATGCTA
 TTAGGTGAGG GGGGTGAGGA AAAGTAGAGA GGTGTAAGGA AAGTGAGTGC CTCCCCACTC
 CCCTGGTCCC ATGAAATGGA AAATTCTAAG ATTATCAAAT CTCTGGGCTA GAAACAGCAG
 TCAtggcaga gactgactag atgttcacca aacctatcac ctcttcttcc agagccaaag
 caacacattt cccaggttcc tttgcagcta gctgcagcca tgtgactaag ttctagccaa
 taggatgtga gactctttca aacctggccc ataaatactt cccactccct cagttccccc
 atcccctgag caagacttgt tccgtctttc cccatctgct agctgaatgg aggggacact
 gaggacctag aggagggcag agccacaggt agaaggggac tgggtccctg aagaccacat
 agagaggtga gcccctggcc cccacctgTT AGACTTTACG GGGAGGCACG GCTCATCACT
 GTGCGT

  Submitted Frequency for ss11111832 back to top
There is no frequency submission for ss11111832.


  dbSNP summary of Genotypes for ss11111832 back to top
No sufficient data to compute Hardy-weinberg probability for ss11111832.


  Submitted individual genotype for ss11111832 back to top
There is no individual genotype data for ss11111832.

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