| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_021877.15_5149827 | | RefSNP(rs#) | rs7354818 | | Submitted Batch ID | CHR20_NA17119_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_021877
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119_200306 | | Ascertainment Samplesize | 3 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45080-1743b10.q1kposition:-553quality:34sequence:20SNP45080-586e02.q1cposition:-371quality:40 |
>gnl|dbSNP|ss11118886|allelePos=241|len=506|taxid=9606|alleles='A/G'|mol=Genomic TCTCCCTTAC CTGCCCTCTC AGCCTCAAAC TGATAATTTG GAAAAAGAGG CGCCTGGAAA
AAACCACTTC CAGGGTACAG CAGGAACCAG CCTCACTCTT CTTTCTCTCT TTTAAAAATT
ATTACGATTT TTACTGAGAT GGGTTCCAAG TATCACTCTC CACCACCTCA TCACCTTCTG
GGACCTGGAT GGACTCCAGA tcactatgtt gcctaggctg gtctcaaact cctgagctca
R
gtaatcctcc ggcctcggcc tcccaaagtg ttgggattac aggcgtgagc cactgttgcc
tggTCTGGCC TCGCTTTTAA TTTTGGCTTC CTGGAGGCTT TTGCTGAGGT AGAGATGCAG
GCCACCCTTG CCTGACAATG CCTTCCAGGC AATTGAGTGG CTGAGCCAGT GGGAGAAGGT
GGGCTTCTCT CACTCCCAGG TGTGGTGGTA GTGAACCAGC CCAGGTGGTC AACATGAACT
GGGAACATGG AAGACAAAGG TAAAA
There is no frequency submission for ss11118886.
No sufficient data to compute Hardy-weinberg probability for ss11118886.
There is no individual genotype data for ss11118886.
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