| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_021877.15_1736211 | | RefSNP(rs#) | rs7354826 | | Submitted Batch ID | CHR20_NA17119_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_021877
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45080-1675g11.q1kposition:411quality:56 |
>gnl|dbSNP|ss11118899|allelePos=734|len=1550|taxid=9606|alleles='C/T'|mol=Genomic CCATTGTCCC CTGGGCAGGA TGGGAGTTTG CTGCCCTGAG GCCTGTGTCC TGTCTTCTCA
AGAAGACTTT TACTGTACTC CGGAGGGCCT TGGTGACTCT CAGACAGTCT CCGTCGCAGT
TAAGGACAGA CTGAGAGGGA AGAGGATTAA TCCCCAACAT GAGAGATCCA GTTTCGACAC
AAAGAAttaa cagtggaggg tgttcaggtt cttgatgtct tgaacaaaga attggacaaa
acgcacaaac aaagcaagga aggaatgaag ggatttattg aaaatgaaag ttcactccac
agtgcgggag cgggcctgag cataggggct caaaggccct gttatagaat tttgggggag
tttaaatacc ctctgcttgg agtatgtctt atgtaaatga agaggatgaa gtaaagttac
aaagtcattt acagccagtg tacgcctatg gagaggatat tttctgtcag agctgaagtg
tgaatcagcc ttatgttccc tgcctccaga ccctgttttc ctgcctcaGA ATGACTCTGT
TAtttttgtt tgtttgtttt tttgagacag agtcttgctc tgttgcctaa gctggagtgc
agtggcaggg tctcagctca ctgaaaactc cacctcccgg gttcaggcaa ttctcctgtc
ccagcctcct gagtatctgg gattacaggc gcccaccacc gtgcccggct aatttttata
tttttagtag aga
Y
ggggtttcac catcttggcc aggatggtct caaactcctg atctcgtgat ccacctgcgt
cagtctccca aagtgctgag attacaggtg tgagccaccg cacctggccC TAGAATGACT
CTTTACAGCA CTGTGGGATG CTGAGACCAC AGAGTGAGGG CAGCCTGTGG GACCTGAGAA
GCAGCACAGC CATGGaaaag caaatgaact ttggggccaa agagcctggg ttccaacctc
agacctgtta cctactagct gcgacccctt ggacaaacta cttaatctct ctctgcctca
gtttcctcaa ctgtaaaaaa aaaataagga ttggccaggc atggtggctc acacctgtaa
tcccagcact ttgggaggct aagatgagga ggattgcttg agcctatgag ttcaagacca
acctgggcaa catagtggga ccccattcta aaaaaaaaaa ttagctgggt atggtggcac
acgcctctag ttccagttac tcaagaggct gagttggtta gattacttga gcgctgtagt
gagctgtgat tgcaccacta cactctcacc tgggtgacac agtgagacct tatctcaaag
aaaaaaaaaa ggaggaggag gatgataata cgtatttcac agggttggtg taagaattaa
aggagttagt gcttagaaaa tggcctggcg catagtaggt gcCATGACAG TGTTAGCCCT
TATAATATTA ATATTAATGA TGCTGATAAT GATTCATATT ATCATTTTCC TCCAGAGAAA
TTTTTAAGAA AATAGGAGAG GGTCTTGGCA GTGTGG
There is no frequency submission for ss11118899.
No sufficient data to compute Hardy-weinberg probability for ss11118899.
There is no individual genotype data for ss11118899.
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