NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss11118904           
Submitter
HandleSC_SNP
Submitter SNP IDchr1.NT_004754.14_3492198
RefSNP(rs#)rs7354830
Submitted Batch IDCHR20_NA17119_200306
Submitted DateJul 03, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA17119_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45080-1734c03.p1kposition:-202quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11118904|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AAATAGCATA TGCTCTAGGC ACAATTGTGT TTTAAAACTA CTCCTCATTC CCTCACCCAG
 TCAGCACATA TTATTCCCAG CCCTGACCAG ATGCTCTTTA CCTCAGAACT ACAGCTCATA
 CTTGAAAGAC ACCCCACCCC ACTCTTCAAA TCAAAGGCAG CAGAAAGTTC TTCAGGCAAG
 AGTTTTTCCT CCCTGTCACA
 Y
 AGGGAGTAAT TCAATATTCT TTGGAGTAAG CTTCATTTTC AAGTACATTG CAATCACAGG
 ACAATTAATA TGTTGCAGAG AACTTAAAAT CTATAAGTAC AATGTAGATG GCTATCAAAA
 ACTATGTGGG ATGAAAAAAG CAAGTTGGAG AAAACATGAA ATACACTGAC ATTTACGTAA
 ATTTTACAAG TGCCTATGGA

  Submitted Frequency for ss11118904 back to top
There is no frequency submission for ss11118904.


  dbSNP summary of Genotypes for ss11118904 back to top
No sufficient data to compute Hardy-weinberg probability for ss11118904.


  Submitted individual genotype for ss11118904 back to top
There is no individual genotype data for ss11118904.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement