| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_037485.3_2761082 | | RefSNP(rs#) | rs7354836 | | Submitted Batch ID | CHR20_NA17119_200306 | | Submitted Date | Jul 03, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_037485
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 6 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45080-582b05.q1cposition:318quality:23 |
>gnl|dbSNP|ss11118910|allelePos=554|len=1311|taxid=9606|alleles='G/A'|mol=Genomic AGATGCATTT TGTGTCTGGG TTTATCGGGC TTCAATTTAT AACAGatata tatatatata
tatataCACA CACACACACA TAGAGAGAGA GTGTTTATCA ATCGACTGAA ACTCTGTTAT
TAAATCAATA CTATGACTTA GAGTGGACAG TGTCTAGGAA TCAAGGAAAT ATGATAATTC
AATCTCTCCC ACTCGGAACA AGAAttcttt cttttctttt tttttgagat agagtctcgc
tctgttgccc aggctggagt gcagtggcac caccttggct cactgcaacc tctgcctccc
aggttcaagc gattctcctc cctcagcatc ctgaatagct cgcattacag gtatgtgcca
ccatgcccag ctaatttttc tgtttttagt agagatgggg tttcgccatg ttggccaggc
tggtcttgaa ctcctgacct caggtgacct gcccacctag gcctcccaaa gtgctgtgat
tacaggcatg agctaccacg cccagccAAT AATTCTTTCT ACCAcagtct ctccttcagt
atttccactg gaa
R
ggagtctact tcatatccgg gccccccttc cactactgga caccaccatt gcgacaagtt
gttcctttta ttaagctgaa atctatatcc ctataatttt cacccaacaa ttctagtcct
gtcctctgga actatacaaa aGCAGTTAGT TTTTTTCAGG AGGCtattac agattgaagt
ttgtgtctcc ccaaaattca tatgctaaat ccTGGGAGAA GTAGAAATTT GCCCAGCACT
ACATAGGCAC TGTGTACACC TGGAGGGCCT TTAAAAAAAA gaatcctaac ctccaatgtg
gtggtgagcc tttgggagat aattaggtcg tgagggtgaa gtcttcatta atgagattag
tgcccttgta ggaaaaaaca agagagatga tttttctctc agccatgtga tgctatgaga
atgcagccat ctgcaattca tgaagccgac cctcaccaga cactgtatct atcagcacct
caatcttgga cttcccagcc tccgggaaat atgtgaaatc attcgttgtt ttggccaccc
agtctttggt aacttgttat agcaatccaa acTAACACAG AGCAAAGTCT TAGTACAATA
AATctctgga ggcagacaga tttggctttt aaacctgact ctgacactta tcagcaatgt
acttaacttc tcagagcctA TTTCCTCATT TGCTAAGTGG GCTGAAGTCC CCATGGTTGT
GAGAGTTAAA TGAGTTAAAT ATACTCTAAC CCTAACC
There is no frequency submission for ss11118910.
No sufficient data to compute Hardy-weinberg probability for ss11118910.
There is no individual genotype data for ss11118910.
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