NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss115669599           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000012_NCBI36.1_chr9_76344
RefSNP(rs#)rs7875699
Submitted Batch IDILLUMINA_WTSI:NA18507_c9
Submitted DateJan 15, 2009
Publication Cited18987734
First entry to dbSNPJan 15 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115669599|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ATATGGCCAT CTCAATAGAT ATAGAAAAAG CTTTTGACAA AATTCGAAAC CCTTTCATGG
 TGAAAAAAAA ACACCCAACA GATCACGTAT TGAGGGACTG TATCCCAACA AAATAAAGGC
 CATATATGAC AAACCCATAG CTAACACCAT AATCAATGGT GAAAAGTTGA AACTTTTCCT
 CTACCATCAG GAACAAGACA AGGATGCCCA CAGACACCAC TTCTCAGGGT AATTAGGCAA
 TAGAAAGAAA
 Y
 AAAAGGCATC CTAATAGGAA AGGAAGAAGT GAAATTGTCT CTACTGACAG CATGATCTTG
 TTATATATAG AAAACCCTAC AAACTTCACT GAAAAAAGGT TAGAACTCAA CACAAAGAAG
 GGAACAATAG ACACTGGGGG GACTCCAAAG GTGGGAGGGA AGGATGGTGG GAGCAAGAGT
 TGAAAAACTG CCTATCGATT ACTATGCTCA CTGCTTGGGT GGTGGGATCA TTAGAAGCCC
 AAACCTCAGC

  Submitted Frequency for ss115669599 back to top
There is no frequency submission for ss115669599.


  dbSNP summary of Genotypes for ss115669599 back to top
No sufficient data to compute Hardy-weinberg probability for ss115669599.


  Submitted individual genotype for ss115669599 back to top
There is no individual genotype data for ss115669599.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement