NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss115818566           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000003_NCBI36.1_chr8_144878
RefSNP(rs#)rs4046287
Submitted Batch IDILLUMINA_WTSI:NA18507_c8
Submitted DateJan 16, 2009
Publication Cited18987734
First entry to dbSNPJan 16 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115818566|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 CAGAATCAAA TCTGTAGATC TCTGCCATTC ATAAGTATTT GGAGTTTAAA ATTAGCATAA
 AGATTTTCCT TAAAATAAGA AGAAATGCCT TGAGTAGGCT TTTGGAACAT AGGATGTTTC
 CACTGGTTCA TTTCTGTGTT CAATATTCCC ACATGAATCT AAACACGACT CTGCTCTTAG
 TAGCTATGTG ACCCTGGGAA AGTCACTCAA TCTCCCTCAG CTAAATTTTG TTGTGTGAGT
 AATGAGGAGA
 S
 AGTTGTGATT TGTATTTAGT GAATAATAAC AAAAGGCATT TAGCTTTCTG GAACCTGGTA
 TGTAGTAGAA CCTCATGAAA TACTAGCTCT GTTGATAAAA CTAGACTGAA AGAAGCTTTC
 AAAGTCAACA ACAGTTTGAG GCAGTGAAGG ACGTAGAGGA GAAGCTGCTG CTGCAGGGGC
 CTGTAGCTCC TGGAAGCCCG TTTTGTCCAT GATTTAGCAG GAATGCATTA CCCTTCCATG
 ACGAGGCACA

  Submitted Frequency for ss115818566 back to top
There is no frequency submission for ss115818566.


  dbSNP summary of Genotypes for ss115818566 back to top
No sufficient data to compute Hardy-weinberg probability for ss115818566.


  Submitted individual genotype for ss115818566 back to top
There is no individual genotype data for ss115818566.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement