NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss115818569           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000006_NCBI36.1_chr8_146653
RefSNP(rs#)rs7843227
Submitted Batch IDILLUMINA_WTSI:NA18507_c8
Submitted DateJan 16, 2009
Publication Cited18987734
First entry to dbSNPJan 16 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115818569|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 AGGCGCAGAG ACGCACGTCG CTGGGCTCAG GATGGCGGGG CGTGTTGCAG GTGTACAGTT
 GCACGCCGCC GGGCGGGGAG CGCGGGAATG GCGAGGTGCA GGCGCAGAGA CACACGTCCC
 CGGCGGCGCA GCGCACAGAC GGGTGGAACC TGAGTAATCT GAAAAGCCCG GTTCGGGTGC
 CCCCTGCTTG TACCCGGGCA CTACAGGACC TGCTTGCCCA CGGTGCTGTG CCATTGCGCC
 CCCTGCTGGC
 R
 ACTAGGGCAA CTTCAGGGCC CTCTTCCTTA CAGTGGTGTC CAGCGCCTCC TGCTGGCGAC
 GGGGCACGGC AGGGCTCTCT TGCTCGCAGT ATACTGGCGG CACGCCGCCT GCTGGCAGCT
 AGGGACATTG CAGGGCCCTC TTGCTCACAT TGTAGTGGCA GCACACCCGC CTGCTGGCAG
 CTGGGGACAC TGCCGGGCCC TCTTGCTCCA AGTGTAGTGG CGGCTGCTCC CCTGCTGGCA
 GCTGGGGACA

  Submitted Frequency for ss115818569 back to top
There is no frequency submission for ss115818569.


  dbSNP summary of Genotypes for ss115818569 back to top
No sufficient data to compute Hardy-weinberg probability for ss115818569.


  Submitted individual genotype for ss115818569 back to top
There is no individual genotype data for ss115818569.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement