NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss116933750           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000026_NCBI36.1_chr3_50943
RefSNP(rs#)rs9714344
Submitted Batch IDILLUMINA_WTSI:NA18507_c3
Submitted DateJan 18, 2009
Publication Cited18987734
First entry to dbSNPJan 18 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss116933750|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 GCATCCGAAG TAGCTGGAAC CACAGGCACG TGCCACCACA CGCTGCTAAT CTTGTTTATT
 TTTTGTAAAG AGGAGATTTC ACCATATTGC CCAGGCTAGT CTCAAACTGC TGGGCTGCAG
 CGATCCTTCC ACCTCAGCCT CCCAAAGTGC TGGGATTACA ATTGTGAGGC ATTATGCCAG
 CCTGCAGGCC CTTCTTGGTT TCTAAGTGGC ATAGCCTCCC CCTGTGTTTG TAAGCTTTAC
 GGCAAGCTTG
 S
 CCAACCTGTG GCCCACGACT TTGAATGTGG CCCAACATAA GTTTGTAAAC ATTCCTAAAA
 CATTATGAGA TTTTTAGGTG ATTTTTTTAA AGCTCATCAG CTATCACTAG TGTTAGTGTA
 TTTTATGTGT GGCCCAAGAC AATTCTTTAT CCAGTGTGGC CCAGGGAAGC CAAAAGAGTA
 GACATCTCTG CTTTACGGTG ACCAGCCAAA TAGGAAATAT GGGCTTTTAT GCAAAACACA
 TTGTCCCAAT

  Submitted Frequency for ss116933750 back to top
There is no frequency submission for ss116933750.


  dbSNP summary of Genotypes for ss116933750 back to top
No sufficient data to compute Hardy-weinberg probability for ss116933750.


  Submitted individual genotype for ss116933750 back to top
There is no individual genotype data for ss116933750.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement