NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss117354600           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000026_NCBI36.1_chr22_15232820
RefSNP(rs#)rs76863509
Submitted Batch IDILLUMINA_WTSI:NA18507_c22
Submitted DateJan 19, 2009
Publication Cited18987734
First entry to dbSNPJan 19 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117354600|allelePos=251|len=501|taxid=9606|alleles='T/A'|mol=Genomic
 GTGAATGGAA TCATCATCGA ATGGAATCGA ATGGAATCAT TGAATGGAAT TGAATGGAAT
 CATCATCAAA AGGAATAGAA CTGAATCATC GAATGGATTC GAATGGAATC ACCGAATGGA
 ATTGAATGGA ATCAGCACAG AATGGACTCG AATGGAATCA TCATCGAATG TAATAGAATG
 GAATCATCGA ATGCACTCGA ATGGAATCAT CGAATGCACT CGAAGGGAAT CATCTTTTGG
 AATCGAATGG
 W
 ATCAGTGAAT GGACTCGAAT GGAAAATCAT CGAATTGAAT CAAATGGAAT CATCATTGAA
 ATGAGTAGAC TGGACTCATC ATCGAAGGGA ATCGAATGAA ATCATCGAAT GGAATTCAAT
 GGAATCATCA AATGGACACG GATGGAATCA TCATCGAATG GAATCTAATG GAATCCTGGA
 ATGGACACGA ATGGAATAAT CATCGAATGG AATTGAAAGG AGTCATCGAA TGGACTCGAA
 TGGAATCATC

  Submitted Frequency for ss117354600 back to top
There is no frequency submission for ss117354600.


  dbSNP summary of Genotypes for ss117354600 back to top
No sufficient data to compute Hardy-weinberg probability for ss117354600.


  Submitted individual genotype for ss117354600 back to top
There is no individual genotype data for ss117354600.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement