NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss117448215           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000011_NCBI36.1_chr21_9859378
RefSNP(rs#)rs62217749
Submitted Batch IDILLUMINA_WTSI:NA18507_c21
Submitted DateJan 19, 2009
Publication Cited18987734
First entry to dbSNPJan 19 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117448215|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TGCAATGGAA TGGAATGGAC TCAAATGGAA TGGAATGGAC TTGAAAGAAA TGAATGGAAT
 GGAATCGACT CAAGTGGAAT GGAAATGAAT GGAATTGACT CCAATTGAGT GGAATGGAAT
 GGAATGTCCT CGAATGGAAT GGGATGGATT GTACCCGAAT GGAATGGAAT AGAATGGAAT
 GGACTAGAAA GGAACACAAT GGAATGGATT GGAATGGACT CGAATGGAAT TCTACGGAAT
 GGAAAGGACC
 Y
 GAAAGCAATG GAATGGAAGG GAAGGGAATA GAAAGGAATG GGATGGACTC GAATGTAATG
 GGATGGACTC GAATATTATG GAATGGAATT AACACGAATG GAAAGGAATG GACTAGAATG
 GAATGTAATG GATTAGAATT GTAACGAATT GAGTGGAATG GAATGGAATG GAATGGAATG
 GACTCAAATG GGACGGAATG GAATGGACCC GAATGAAATG GAATGGAATT GAATGGTATG
 GACTCAAATG

  Submitted Frequency for ss117448215 back to top
There is no frequency submission for ss117448215.


  dbSNP summary of Genotypes for ss117448215 back to top
No sufficient data to compute Hardy-weinberg probability for ss117448215.


  Submitted individual genotype for ss117448215 back to top
There is no individual genotype data for ss117448215.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement