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Submitted SNP(ss) Details: ss117452087           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000019_NCBI36.1_chr20_39088
RefSNP(rs#)rs2002370
Submitted Batch IDILLUMINA_WTSI:NA18507_c20
Submitted DateJan 19, 2009
Publication Cited18987734
First entry to dbSNPJan 19 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117452087|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 TCAGAGATTA TCTGCCAGGA CCTTTGAAAT ATGCAGGGTT AGGACAACCC CAAATCTTCT
 GAGTTAACCC TTTATTACAC AGTCCACCCC ATACCCCTTA GCCTAGGCTG TCTTTCAGCA
 AAACAATTCT ATATTTCTGA GCATCTACAT TTAGTATAGC ATTTATATAA CAGATCTAGA
 AATAGTATCA GTATGAAGAA AGATCTCTAG TTATAGTAGA TAAAATATAG CAGTGGAAGG
 CCCAGCATAC
 Y
 ATGGTTGTGC TATGCTCAAA AACATTTGGA GGAGCTAGTG TGGGGTAGGG ATAAAGATTT
 TAAAAACAAC TAATCTATCT CATAAAGCCA TTACATACAT TTTCATATTT TTGTACTGAT
 TTGTTACTTG TTTCTCCCCT TGATCTACCA CTTTAATCTT ACAGCTGCAG AATTATTTAG
 CCTAGAAATT AGTTTATGGT TAACTAAATC CAATTCTTCC TTAGGCTAGT CATTTTCCAT
 TGGTAATACA

  Submitted Frequency for ss117452087 back to top
There is no frequency submission for ss117452087.


  dbSNP summary of Genotypes for ss117452087 back to top
No sufficient data to compute Hardy-weinberg probability for ss117452087.


  Submitted individual genotype for ss117452087 back to top
There is no individual genotype data for ss117452087.

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