NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss117555070           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000021_NCBI36.1_chr2_10994
RefSNP(rs#)rs73907804
Submitted Batch IDILLUMINA_WTSI:NA18507_c2
Submitted DateJan 19, 2009
Publication Cited18987734
First entry to dbSNPJan 19 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117555070|allelePos=251|len=501|taxid=9606|alleles='C/A'|mol=Genomic
 TGGAGGATCT TTGGTAAATA TAAAATGAGT TATAAGAGAG AGAAAAATTA TTCACAATTT
 TATCACTCAA ATTTTGATAA TTATATTCCT GCATTTTTAA TGAAATGTAG AAATTTTAGA
 TTATACTATA CATAAAATGT TGTTTCTGTT TTTTCATCCA ATATTAGATA ATAAACGTTT
 TACGTGGCAT AAACTATATA TGTAAATCAG CTATTTCCAA ACCTGGATGC TTGATTTAAC
 CCTCCTTATA
 M
 CGTTAGCCAT TTAAATGATT TCTCCTTTAT CCTATGAATA ACACTTCCAC CAGTTATTAT
 TCTTATATAT AGCTCATTCA ATCACGCATA ATCTTGTTGA ACATTTACTT ACAATTTAAT
 TGCATACTAC CTGAGTGGAT TGTGGTTATA TGTTTATATG CTTATTCCAA ATATAGTGCT
 AAGATTAGCA TTAGAGACAG GAAAATATTC ACAGGTTTTG AAACCAGAAG GAGCCAAACA
 CAAATCCACG

  Submitted Frequency for ss117555070 back to top
There is no frequency submission for ss117555070.


  dbSNP summary of Genotypes for ss117555070 back to top
No sufficient data to compute Hardy-weinberg probability for ss117555070.


  Submitted individual genotype for ss117555070 back to top
There is no individual genotype data for ss117555070.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement