NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss117967034           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000004_NCBI36.1_chr17_13546
RefSNP(rs#)rs6565704
Submitted Batch IDILLUMINA_WTSI:NA18507_c17
Submitted DateJan 20, 2009
Publication Cited18987734
First entry to dbSNPJan 20 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117967034|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AGTCTAATTA AGTTCTGACT TTCCATGGCT CAAGGTCACC TTGATGCTTT TATTTAACAG
 CAATTTTTCT CTCTCCTGTC CGAGATGCAC CTGTTGTGCT GGTGCCCTGA GCACATGTGT
 GGTCGGACGC TTGGGTCATC CGGCGTAGGA ATGAGGGGCA GATTCTGCCC ACTTCATCCC
 CCTTGCGGAG AGTCAGGGAA CAGCCCATCA ACACGTTAGA TGCTCTGAGA AGTCCTGTGG
 TACAGAAACC
 Y
 GTTTAACAAT GTTTCCCCAT GTTATTTAAC CACAGAGTCC TTTGTTTGCA CCTAATAGTA
 ACTTCCAGCT GAGAATGCTT CTTATAAAAT GCTGGCCTGG AAATTCTCCA GGGGTTTCCC
 CAGATCAGCA GGTAGGTAAC GCTGACTCGT GAGGTCCCCA GGAGGCAACA GGGTGTGGGG
 CAGACTGGGT GCTCTGTGTG CAGTTGAATG GCTGAGGTCC CATCAGCTTG CTTGGACTCT
 GAGGGGAGTG

  Submitted Frequency for ss117967034 back to top
There is no frequency submission for ss117967034.


  dbSNP summary of Genotypes for ss117967034 back to top
No sufficient data to compute Hardy-weinberg probability for ss117967034.


  Submitted individual genotype for ss117967034 back to top
There is no individual genotype data for ss117967034.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement