NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118152915           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000019_NCBI36.1_chr15_18269812
RefSNP(rs#)rs73398169
Submitted Batch IDILLUMINA_WTSI:NA18507_c15
Submitted DateJan 20, 2009
Publication Cited18987734
First entry to dbSNPJan 20 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118152915|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 TGAAGATATT TCCTTTTCCA CCACAGGCCT CAAAGCTCTC CAAATGTCCA CTTGCAGATT
 CTATGAAAAG AGAGTTTGAA AACTGCTCAA TCAAAAGAAA GTTTTAACTT TGTGAGATGA
 ATGCACACAT CACAAAGAAG TTTCACAGAC TGCTTCTGTC TAGATTTTAA GTGAAGATAT
 TTCCTATTCT AACATAGGCT GCAAAGTGCT CTAAATGTCC ACTTGCAGAT TCCTCAAAAA
 CAGTATTTCC
 R
 AACTGCTCAA TCTAAAGAAA GCTTGAACTC TGTGAGATTA ATGCACGCAT CACAAAGAAG
 TTTCTCAGAA TTCTTCTGTC TGGTTTTTAT GTGAAGATAT TTCCTTTTAC ACCATATACC
 TCAAAACGCT CCAAATGTCC ACTTGTAGAT TATTCAGAAA GAGTTTCAAA ACTGCTCAAT
 CAAAAGGAAG GATTATCTCT GTAAGATGAA TGCACACATC ACAAGTTTCT CAGATTCCTT
 CCATCTAGAT

  Submitted Frequency for ss118152915 back to top
There is no frequency submission for ss118152915.


  dbSNP summary of Genotypes for ss118152915 back to top
No sufficient data to compute Hardy-weinberg probability for ss118152915.


  Submitted individual genotype for ss118152915 back to top
There is no individual genotype data for ss118152915.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement