NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118366341           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000025_NCBI36.1_chr14_18159493
RefSNP(rs#)rs56169440
Submitted Batch IDILLUMINA_WTSI:NA18507_c14
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118366341|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ATTTTTTTTA ATCATCTGGT CTTTTAAGAT GTTTTTAGAC TTATAGATCA AGATAAGATG
 TTAGCATACA TTTATCCTTC TTTCAATTTG TATCCATCCC TAACTTATTT CTTCCTATTG
 TGCAATAGCT CATTATTAAG CTGAGCTTCC ATTTTACTCA TTCATGTTTA TTTATGGGTC
 AGGCAAGTGA ACTGCATACA AATTCACAAA TTTTCTTTTT TTTTTTTTTT GAGATGGAAT
 CTTGCTCTGT
 Y
 GCCCAGGCTG TAGTCAGTGG TGCAGTCTTG GCTCACTGCA AGCTCTGCCT CCAGGGTTCA
 TGCCATTCTC CTGCCTCAGC CTCCCGATTA GCTGGGACTA CAGGCACCCA CCACCACACC
 TGGCTAATTT TTTGTGTTTT TAGTAGAGAC TGTTTTTCAC CATGTTAGAC AGGATGGTAT
 GGATCTCCTG ACCTCATGAT CTGCCCACCT CAGCCTCCAA AAGTCCTGGG ATACAGGCTT
 GAGCAACCGC

  Submitted Frequency for ss118366341 back to top
There is no frequency submission for ss118366341.


  dbSNP summary of Genotypes for ss118366341 back to top
No sufficient data to compute Hardy-weinberg probability for ss118366341.


  Submitted individual genotype for ss118366341 back to top
There is no individual genotype data for ss118366341.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement