NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118438125           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000005_NCBI36.1_chr1_51305
RefSNP(rs#)rs2531261
Submitted Batch IDILLUMINA_WTSI:NA18507_c1
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118438125|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 AAAAAATTCT AGTCATTATA AAAATGATTG ATTAAATGAG GGAAGTAGTA GAGTTCTTCA
 TTTCTTTAGT TGGTTTAGTC TCCTATGAGT CAATCCTATT TTCAAAATTC TTAATAAACC
 ATTTATTCCT TCAACTTTCT ATGCCATTTG ATGTTTTGTA AAAAAAAAAA TATAATATGT
 ATACAAAAAG ATATTTCAAA ATCTAGAAAG AGAGCTTTAG AGCTTTGTAA AGCTCTTTTA
 AAAATCAAAA
 R
 CAACTACTGT TAATTAACAT GTTGTACTAT GCAATTTGTT TACCATTATT ACTCTTGGTA
 TTTTTAAGAA AAGTCTTTCC ATTGTTATTA TAAATGCTTC TATTGATATT TATTTTAATA
 ACTGTTATTA CAGTCCGTCA TGTACATACA CTATACTTAA ACCTAATGTT TGGTATTTAA
 ATCGTTTCAA GATTTTATCA CTGTCAACAA AGTATGATGA ATATTTTTAT GCTGAAAACT
 TCTGTAAAAA

  Submitted Frequency for ss118438125 back to top
There is no frequency submission for ss118438125.


  dbSNP summary of Genotypes for ss118438125 back to top
No sufficient data to compute Hardy-weinberg probability for ss118438125.


  Submitted individual genotype for ss118438125 back to top
There is no individual genotype data for ss118438125.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement