NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss12137618           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr11.NT_009237.15_27902581
RefSNP(rs#)rs331462
Submitted Batch IDWI-WGS-200306-C
Submitted DateJul 04, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 4 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWI-WGS-200306
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S213P62606RC8.T0position:107quality:40sequence:S213P63200FA8.T0position:-733quality:36

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12137618|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 GGGCAAAACT AACAAAATAC AACGAAGGAG TTTGTAAATC TTTCTGGACT TTGTTTTCCT
 AAAGCTCAAG TTCTTCCAAG AGTTTAGAGA AGTGGAGTGG GAGAGGACCT GAATATTGGG
 GGAAAAGAGA GGAGATGGGG TTTTCCTTCC AGAAAACGAG ATTACCTCAG ATTGGGGGAA
 GGAGGGAGAG GCAGACGCAA
 Y
 AGGACCAGGC CCTGAGAGGC GAGGCTGCAG GGGCTGGATG GACTGGAGCC CAGACCACAT
 GGAATTAGAG AAAGGCTGCG CTGGGAGGGC CCTGAAAATA GGGTCCTGGG AGGTCAGGCT
 GACCCCTGTG GACTAAAGAT CCTTGACAGC GTTCGCGTGT GTGTGTGTGA ACAAATTTGG
 CCTCTAACCT TCCGGGCAGT

  Submitted Frequency for ss12137618 back to top
There is no frequency submission for ss12137618.


  dbSNP summary of Genotypes for ss12137618 back to top
No sufficient data to compute Hardy-weinberg probability for ss12137618.


  Submitted individual genotype for ss12137618 back to top
There is no individual genotype data for ss12137618.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement