| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_037485.3_2218999 | | RefSNP(rs#) | rs8179260 | | Submitted Batch ID | CHR20_NA11321_200306 | | Submitted Date | Jul 14, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 14 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_037485
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45081-1277a09.q1cposition:277quality:29 |
>gnl|dbSNP|ss12568719|allelePos=776|len=1269|taxid=9606|alleles='G/A'|mol=Genomic CTTTTGAAAG ACAAAGTGAA GTCAGAAAGA TCATGGACTC TCCGGGGTCA GCAGATCTGT
GACTGAATCC CTCCCCTTCC ATGTATTAAC CTCGAGCAGG TTATTTTCCC TGCCGTGTGT
AACCCCATTT ATAAAATGAG TGAAATTATT AAAAGGGGAT GTTTGAggct gggcacagtg
gctcacacct gtaatcccag cacttgggga ggctgaggcg agtggatctc ttgagctcag
aaatttgaga ccagcctggg caacttggcg aaaccctggc tctaccaaaa atacaaaaat
tagctgggtg tggtggcaca cacctgtagt cccagctact tgggaggctg agatgggcaa
atcgctgatc gcttgagcct gggaagcaga ggtagcagtg agccgagatc acgtcactgc
actccagtct gggtgacaga gtgagaccct gtctcaaaaa aaaaaaGGGG GGATGTTTGA
AAGTGTCTGG TATACTGCCt gcctggcaca tagcaggcgt tcaataaatg gtgacattat
tattAttttt attattttga gatggagtct tgctctgtca ctcaggctgg agtacagtgg
cgcaatctca gctcactgca acctctgcct cccggggtta agcaattctc atgcctcagc
ctcctgagta gctgggatta caggctcatg ccaccacgcc cagctaattt ttgtattttt
agtagagaca gggtttcacc atgttgacca agctggtctc gaactcctga cgtca
R
gcgatttgcc cactgcagcc tcccaaagtg ctgggattat aggtgtgagc caccacgacc
agccCCAGTG GTGACATTAT TAATACTTGT TGAATCCCTT GCCCTGCAat agtttaatag
ttaggtaggc aggctcagga gtcatattgc caggatttga atcctagatc tgcttcttac
tagctgtgta aacacattgc tttacctatt tctcagtttc cttattgtta aaatggagtt
aataatacct atttcatagg gttgtgatga ttaaatgaga taattcatct acagtccctg
ctacatagta agtgcttaag aaatgttagc tctcattTTG GTGTATTTCC TTTGAATTTA
TAATACAAGC AATTTTCCCT CACAGTTTAG CACGCACTTA TATTATATAT TCTTTAATTA
ATTCAAGCTT TTTGATATTG TCACCCCAAG CAGAGAGATC ACTGTTAGTT TTGTGGAGAC
CATGCATTAT ACA
There is no frequency submission for ss12568719.
No sufficient data to compute Hardy-weinberg probability for ss12568719.
There is no individual genotype data for ss12568719.
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