| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_032977.5_742273 | | RefSNP(rs#) | rs8179276 | | Submitted Batch ID | CHR20_NA11321_200306 | | Submitted Date | Jul 14, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 14 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_032977
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45081-1193c02.q1cposition:-81quality:32 |
>gnl|dbSNP|ss12568738|allelePos=581|len=788|taxid=9606|alleles='G/A'|mol=Genomic GGTTTAGCTC ATGACatata atttatttaa tatgaaatat atttaaGTGG GGTGCAAATC
TGGGGTCTCA CTAATTCTCA CAACATCATT ATATCATATA TCATTACACA TGTGatatat
aatgtatttt acatatgtaa tttattttaa aatatatatt tatttcaaat aaataaaaGA
GAGTTTGAGC TGCTCAAGTT GCATTAAAAG GAGCCATGAT GTTAAACATA CAAAGAGTTG
AGAAACACTG TCTTGGGTGA AGGGACGTTT CTAGGAGCCA TTTTTTTGGT GGTGGtttgt
tttttttgag acaggatttc actctgttac ccaggctgga gtgcactggc gtgatcataa
ctcactgcag cctcaaactc ctgggctcaa gcaatcctcc tgcttcagcc tcccgaatag
ctagaactac aggtgcgtgc catcatgcct ggctaatttt taatttttag tggagacgtg
atcttgttat gttgcccagg ctggtctcaa actcctagcc tcaagtgatc ctccctcctt
ggcctcccaa agggtcagga ttacaggtgt gagctactgc
R
cccggccTAG GGAGCCATTC TTGGAGAAGA TGATGTTTAG GAAGTCATCG GGAAGTACTG
GGGCAGGACT CTTGAGTTCT ATTTCTGTAG TGACCCCCAC ACACTGTGGG GCCTAGGGCA
AAGATGGGGA AACCTTTGGG GCCTCATAGT CTGGCTCTGC CAAGGTGTCC ACACTCCATG
GAGGACTGAG TATGAATGGG TGTGTGA
There is no frequency submission for ss12568738.
No sufficient data to compute Hardy-weinberg probability for ss12568738.
There is no individual genotype data for ss12568738.
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