| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_032977.5_18065561 | | RefSNP(rs#) | rs6660166 | | Submitted Batch ID | CHR20_NA11321_200306 | | Submitted Date | Jul 14, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 14 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_032977
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321_200306 | | Ascertainment Samplesize | 3 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45081-684f03.p1cposition:331quality:42sequence:20SNP45081-684c03.p1cposition:334quality:37 |
>gnl|dbSNP|ss12568739|allelePos=206|len=817|taxid=9606|alleles='T/C'|mol=Genomic GTAGGAATTT GAATTGGAAA GTAGCTCCGG CCATCTGCTC CAGCCTGGAT TTGGGCACAC
TCTTGTCTAC ATGGCTTTCC TCCTCCTGCA GCCTGGTGAA AAGCTGCTCT TTCAGGAAAG
GGCCATTCTG ATGTCATTGC TTCTTGGAAG TCTTCCCTCA CCTGCTCTGG CAGAATTCAT
CTCTTTCCTC TGCACATAAC ttttt
Y
tttttgagac gagtctcgtt ctgtcaccca caccggagtt cagtggcgct atctcggctc
gctgcaacct ctgcctcccg ggttcaagcg attctcttgc ttcagcctcc caagtagctg
ggattacagg cgtctgccac cacgcccggc taatttttgt atttttcgta gagatagggt
ttcaccatct ctacgaaggt tcgaggtcag gctggtcgcg aactcgggac cttagatgat
ccacccgtct tggcctccca aagtgctggg attacaaatg tgagccaccg cacctgaccT
CCTCTCCTCT GCACATGTCT TATTGATTCT AATGTTGCAG TCATATATCA TGCAGTGTAA
AAATGCCTGT CTCACACCCA GTAAGATATC TGCTGAGTGG CTGCTGTGCG TCAATGTTCT
AGGTGCTGGG GGCAATAGCA TTAAGATAAT CTTGTGCCTC ttttattatt atttatagat
aggggttttg ctttagtgcc caggctggtc tcaaactctt ggctcagtct cccaaaatgt
tgggattaca ggtgtgagcc actgcacctg gcCCATTCTT GGGCCTTTTG TTCTTTCTGC
CTATACCATT G
There is no frequency submission for ss12568739.
No sufficient data to compute Hardy-weinberg probability for ss12568739.
There is no individual genotype data for ss12568739.
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