| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr1.NT_019273.15_5554672 | | RefSNP(rs#) | rs8179277 | | Submitted Batch ID | CHR20_NA11321_200306 | | Submitted Date | Jul 14, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 14 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_019273
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:Chr_20-47841812b09.q1kposition:398quality:46 |
>gnl|dbSNP|ss12568741|allelePos=370|len=892|taxid=9606|alleles='C/A'|mol=Genomic TGCAATAATA AGAAACCGAT ATATGCTAAC AATCAATTTA CAAATATGAT TTAGCACCAT
Tatgttcact tcaatgtgaa ctggttaaat aagcaacatt acattcacat aaaagattgt
tacattagct attaaatgtt actgaagaat atttaataat attaagatgt cagtaatata
ttaaggggaa aaagcagtag acaaaaAAGT TTGCTACCAT TTTTGTAAAA TACTCACACC
CACCCATCCA CTAACATACC CATGCGCCGG TAGAGAAAAA AATGAGAAGC GATATGACTC
CTTCTATTCT CTCTTCATAC TACCCAGTCA GTCCTTCAAC ACTGCctctc tctctctctc
tctctctct
M
tATATATATA TATATATAGt ttttttttca agactgggtc tccctctgtc cccaacgctg
gagtgcagtg gcacaatctc ggcttgctgc aacctccatc tcctgggggg tgtcaagcga
tccacctacc tcagctttcc aagtagctgg gtccacgggt gcgtgccacc acacccaggt
acgtttatta ttattattat tattattatt aattattttt ggtagagatg gggttttgcc
atgttgccca ggctggtctc aaactcctgg attcaagcaa tccaccagcc tcggcctccc
aaagtgctgg aattacaggt gtgagccacc acacccggcc AACACTGCCA ATATTAGCCA
GCAAATACAT TCTTCACAAA TCTCAGCTCA TTACTGAGTT ACTACAAACT AAATTTTAAT
TTCCATTTTA ATATTCTTAC CGTTTCATAC TGAGCAATTC AATTGGTTGT CGAGCAGCCA
GTCTTTCAAA TTCATTTCTC ATTATGTCAG TCTGATGTGT AA
There is no frequency submission for ss12568741.
No sufficient data to compute Hardy-weinberg probability for ss12568741.
There is no individual genotype data for ss12568741.
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