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Submitted SNP(ss) Details: ss12579922           
Submitter
HandleSC_SNP
Submitter SNP IDchr5.NT_006576.13_28553034
RefSNP(rs#)rs8187589
Submitted Batch IDCHR20_NA07340_200306-2
Submitted DateJul 16, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA07340_200306
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP44340-2059c12.p1cposition:-171quality:35sequence:20SNP44340-2059c12.q1cposition:168quality:23

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12579922|allelePos=256|len=511|taxid=9606|alleles='A/G'|mol=Genomic
 GAACGGAGGA aaacagtgtg tctaaactgc tgaatcaaaa gaaagcttaa actctgtgag
 ttgaatgcac acatcacaaa gaagtttctc agagagcttc tttctagttt ttatctgaag
 ataattttgg tgtaaccata ggcctcaatg cactcccaaa tatcccttca cagattctac
 aaaaacagtg tttccaaact tgtgaatgga aagaaaggtt taattctgtg agatgaatcc
 acacatcaga aagtg
 R
 tttctcagag agcttccttg tagtttttat tctgggatat ttacttttct gctattggcc
 tcaaagagct cccaaatgtt cgttcacaga atggacaacc actgtgtatc caaactgctg
 aatcaaaaga atggttaaac tctgtgagat gagtgcacac atcacaaagc agtttctcag
 aaagcttctt tctagttttc atctgaagat attttgtttt tcacagtagg ccccaatgct
 ctctcaaata tccct

  Submitted Frequency for ss12579922 back to top
There is no frequency submission for ss12579922.


  dbSNP summary of Genotypes for ss12579922 back to top
No sufficient data to compute Hardy-weinberg probability for ss12579922.


  Submitted individual genotype for ss12579922 back to top
There is no individual genotype data for ss12579922.

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