| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr5.NT_006431.13_1602 | | RefSNP(rs#) | rs8187593 | | Submitted Batch ID | CHR20_NA17119_200306-2 | | Submitted Date | Jul 16, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 16 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_006431
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45080-566h02.q1cposition:-248quality:56 |
>gnl|dbSNP|ss12579931|allelePos=256|len=511|taxid=9606|alleles='C/A'|mol=Genomic atatccactg gcagattcta ccaaaagagt ctttcaaaac tgctctgtga aaagaaatgt
tcaactgtgt tagttgaatg cccacatcac aaagaagatt ctgagaatat ttctgtctag
tttttattac aagatattcc cgtttccacc aaaggacaca acgcgaagcc aattatccgc
ttgcagatgt tagaaAAACA Cgtttcaaaa cagctctatc aaaggaaagg ttcatctctc
tgggttcaac gcaca
M
atcacaaaga agtttctgag aatgcttctg gctggttggt gtgtgaatat attcctattt
ccaacaaagg cttcaaagcg ctccaaagat tcacctccaa ttgttcaaaa gagtgtttca
aaactgttct gtgaaaagaa atgttcaact gtgttagttg aatgcccaca tcacagagaa
gattctgaga atatttctgt ctagttttta ttagaagata ttcccgtttc caccaaagga
cacaaagcgA AGCCA
There is no frequency submission for ss12579931.
No sufficient data to compute Hardy-weinberg probability for ss12579931.
There is no individual genotype data for ss12579931.
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