| Submitter | | Handle | SC_SNP | | Submitter SNP ID | chr9.NT_078079.1_87191 | | RefSNP(rs#) | clustering in process | | Submitted Batch ID | CHR20_NA17119_200306-2 | | Submitted Date | Jul 16, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Jul 16 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_078079
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119_200306 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45080-377g11.p1cposition:183quality:35 |
>gnl|dbSNP|ss12579939|allelePos=256|len=511|taxid=9606|alleles='T/A'|mol=Genomic actctgttac ttgagtacac acatcacaag aaagattctg agaatgcttc tgtctggttt
ttacgagaag atatcccctt tttcaccata ggcttcaaag cgctgccagt gtccacttcc
aaatattaca aaaagagtat ttcaaaccag ctctatgaaa ggaagtgttc aactctatga
gttgaatgca aacatcacag agaagtttct gagaatgctt ctgtgttgat tttatatgaa
gatattcccg tttcc
W
acgaaacctt catagctatc caaatatcca cctgcagatc ctacaaaaag agtgtttcca
aaatgctgta tcaaaacaaa ggttcaactc tgttagttga gaacacacat cgcaaataag
tttctgagaa tgcttctgtc tagtttttat ttgaagatat ttcctttttc accacaggcc
tgaaagcgct tgaaacgtcc acttgcagat actacagaaa gagtgtttca aagctgctct
atgaaaggga atgtt
There is no frequency submission for ss12579939.
No sufficient data to compute Hardy-weinberg probability for ss12579939.
There is no individual genotype data for ss12579939.
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